BAIT
BCL10
CARMEN, CIPER, CLAP, IMD37, c-E10, mE10, RP11-234D19.2
B-cell CLL/lymphoma 10
GO Process (23)
GO Function (14)
GO Component (11)
Gene Ontology Biological Process
- Fc-epsilon receptor signaling pathway [TAS]
- T cell receptor signaling pathway [IDA, TAS]
- adaptive immune response [TAS]
- cell death [IDA]
- cellular response to mechanical stimulus [IEP]
- innate immune response [IEP, TAS]
- interleukin-6 biosynthetic process [NAS]
- lymphotoxin A biosynthetic process [NAS]
- negative regulation of mature B cell apoptotic process [IDA]
- neural tube closure [ISS]
- positive regulation of I-kappaB kinase/NF-kappaB signaling [IEP]
- positive regulation of NF-kappaB transcription factor activity [IDA]
- positive regulation of extrinsic apoptotic signaling pathway [IDA]
- positive regulation of interleukin-8 biosynthetic process [IMP]
- positive regulation of mast cell cytokine production [NAS]
- positive regulation of phosphorylation [IDA]
- positive regulation of protein ubiquitination [IDA]
- positive regulation of transcription, DNA-templated [IDA]
- protein homooligomerization [ISS, TAS]
- protein oligomerization [IPI]
- response to food [IDA]
- response to molecule of bacterial origin [IEP]
- toll-like receptor signaling pathway [IC]
Gene Ontology Molecular Function- NF-kappaB binding [IDA]
- enzyme binding [IPI]
- kinase activator activity [IDA]
- kinase binding [IPI]
- protease binding [IPI]
- protein C-terminus binding [IPI]
- protein binding [IPI]
- protein kinase B binding [IPI]
- protein kinase binding [IDA]
- protein self-association [IPI]
- transcription coactivator activity [IDA]
- transcription factor binding [IPI]
- ubiquitin binding [IDA]
- ubiquitin protein ligase binding [IPI]
- NF-kappaB binding [IDA]
- enzyme binding [IPI]
- kinase activator activity [IDA]
- kinase binding [IPI]
- protease binding [IPI]
- protein C-terminus binding [IPI]
- protein binding [IPI]
- protein kinase B binding [IPI]
- protein kinase binding [IDA]
- protein self-association [IPI]
- transcription coactivator activity [IDA]
- transcription factor binding [IPI]
- ubiquitin binding [IDA]
- ubiquitin protein ligase binding [IPI]
Gene Ontology Cellular Component
Homo sapiens
PREY
VAPB
ALS8, VAMP-B, VAP-B, RP5-1018E9.1
VAMP (vesicle-associated membrane protein)-associated protein B and C
GO Process (16)
GO Function (7)
GO Component (5)
Gene Ontology Biological Process
- COPII-coated vesicle budding [IMP]
- ER to Golgi vesicle-mediated transport [IMP]
- activation of signaling protein activity involved in unfolded protein response [IDA]
- cellular calcium ion homeostasis [IMP]
- endoplasmic reticulum organization [IMP]
- endoplasmic reticulum unfolded protein response [IMP]
- modulation by virus of host morphology or physiology [IDA]
- negative regulation by host of viral genome replication [IDA]
- negative regulation by host of viral release from host cell [IDA]
- negative regulation by virus of viral protein levels in host cell [IDA]
- positive regulation by host of viral genome replication [IDA]
- positive regulation by host of viral release from host cell [IDA]
- positive regulation of viral genome replication [IMP]
- small molecule metabolic process [TAS]
- sphingolipid biosynthetic process [TAS]
- sphingolipid metabolic process [TAS]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Homo sapiens
Affinity Capture-MS
An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner is identified by mass spectrometric methods.
Publication
Dual proteome-scale networks reveal cell-specific remodeling of the human interactome.
Thousands of interactions assemble proteins into modules that impart spatial and functional organization to the cellular proteome. Through affinity-purification mass spectrometry, we have created two proteome-scale, cell-line-specific interaction networks. The first, BioPlex 3.0, results from affinity purification of 10,128 human proteins-half the proteome-in 293T cells and includes 118,162 interactions among 14,586 proteins. The second results from 5,522 immunoprecipitations in HCT116 ... [more]
Cell May. 27, 2021; 184(11);3022-3040.e28 [Pubmed: 33961781]
Quantitative Score
- 0.794256152 [compPASS Score]
Throughput
- High Throughput
Additional Notes
- BioPlex 3.0 HEK 293T cells CompPASS score = 0.794256152, threshold = 0.75. Quantitative scores are calculated by CompPASS-Plus (Huttlin et al. Cell 2015, PMID: 26186194). The 0.75 threshold represents the top 2% of scores in HEK293T.
- This data may be re-scored from BioPlex 1.0 (PMID: 26186194) and BioPlex 2.0 (PMID: 28514442). Only scores from within the same cell line in BioPlex 3.0 (PMID: 33961781) should be compared directly. For comparison of HEK293T and HCT116 interaction networks with relaxed threshold = 0.1, see BioPlex Interactome (https://bioplex.hms.harvard.edu/index.php).
Curated By
- BioGRID