GPHA2
Gene Ontology Cellular Component
ADAM9
Gene Ontology Biological Process
- PMA-inducible membrane protein ectodomain proteolysis [IDA, TAS]
- activation of MAPKK activity [IDA]
- cell adhesion [IMP]
- cell adhesion mediated by integrin [IMP]
- cell-cell adhesion mediated by integrin [IEP]
- cell-matrix adhesion [IMP]
- cellular response to lipopolysaccharide [IMP]
- collagen catabolic process [TAS]
- extracellular matrix disassembly [TAS]
- extracellular matrix organization [TAS]
- integrin-mediated signaling pathway [IC]
- keratinocyte differentiation [IEP]
- membrane protein ectodomain proteolysis [IDA, IMP]
- monocyte activation [IMP]
- positive regulation of cell adhesion mediated by integrin [IMP]
- positive regulation of keratinocyte migration [IMP]
- positive regulation of macrophage fusion [IMP]
- positive regulation of membrane protein ectodomain proteolysis [ISS]
- positive regulation of protein secretion [IDA]
- response to calcium ion [IMP]
- response to glucocorticoid [ISS]
- response to hydrogen peroxide [IMP]
- response to manganese ion [IMP]
- response to tumor necrosis factor [IDA]
- transforming growth factor beta receptor signaling pathway [IMP, ISS]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Affinity Capture-MS
An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner is identified by mass spectrometric methods.
Publication
Dual proteome-scale networks reveal cell-specific remodeling of the human interactome.
Thousands of interactions assemble proteins into modules that impart spatial and functional organization to the cellular proteome. Through affinity-purification mass spectrometry, we have created two proteome-scale, cell-line-specific interaction networks. The first, BioPlex 3.0, results from affinity purification of 10,128 human proteins-half the proteome-in 293T cells and includes 118,162 interactions among 14,586 proteins. The second results from 5,522 immunoprecipitations in HCT116 ... [more]
Quantitative Score
- 0.979681899 [compPASS Score]
Throughput
- High Throughput
Additional Notes
- BioPlex 3.0 HEK 293T cells CompPASS score = 0.979681899, threshold = 0.75. Quantitative scores are calculated by CompPASS-Plus (Huttlin et al. Cell 2015, PMID: 26186194). The 0.75 threshold represents the top 2% of scores in HEK293T.
- This data may be re-scored from BioPlex 1.0 (PMID: 26186194) and BioPlex 2.0 (PMID: 28514442). Only scores from within the same cell line in BioPlex 3.0 (PMID: 33961781) should be compared directly. For comparison of HEK293T and HCT116 interaction networks with relaxed threshold = 0.1, see BioPlex Interactome (https://bioplex.hms.harvard.edu/index.php).
Related interactions
| Interaction | Experimental Evidence Code | Dataset | Throughput | Score | Curated By | Notes |
|---|---|---|---|---|---|---|
| GPHA2 ADAM9 | Affinity Capture-MS Affinity Capture-MS An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner is identified by mass spectrometric methods. | High | 0.9949 | BioGRID | 1197113 | |
| GPHA2 ADAM9 | Affinity Capture-MS Affinity Capture-MS An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner is identified by mass spectrometric methods. | High | 0.9423 | BioGRID | 2253146 | |
| GPHA2 ADAM9 | Affinity Capture-MS Affinity Capture-MS An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner is identified by mass spectrometric methods. | High | 0.971 | BioGRID | 3253612 |
Curated By
- BioGRID