BAIT
ARHGAP12
Rho GTPase activating protein 12
GO Process (3)
GO Function (0)
GO Component (1)
Gene Ontology Biological Process
Homo sapiens
PREY
SHANK3
DEL22q13.3, PROSAP2, PSAP2, SCZD15, SPANK-2
SH3 and multiple ankyrin repeat domains 3
GO Process (27)
GO Function (8)
GO Component (5)
Gene Ontology Biological Process
- MAPK cascade [ISS]
- N-methyl-D-aspartate receptor clustering [ISS]
- adult behavior [IMP]
- alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor clustering [ISS]
- brain morphogenesis [ISS]
- dendritic spine morphogenesis [ISS]
- guanylate kinase-associated protein clustering [ISS]
- learning [IMP, ISS]
- memory [ISS]
- negative regulation of actin filament bundle assembly [ISS]
- negative regulation of cell volume [ISS]
- positive regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity [ISS]
- positive regulation of dendritic spine development [ISS]
- positive regulation of excitatory postsynaptic membrane potential [ISS]
- positive regulation of glutamate receptor signaling pathway [ISS]
- positive regulation of long-term neuronal synaptic plasticity [ISS]
- positive regulation of synapse structural plasticity [ISS]
- positive regulation of synaptic transmission, glutamatergic [ISS]
- postsynaptic density assembly [ISS]
- regulation of dendritic spine morphogenesis [ISS]
- regulation of long term synaptic depression [ISS]
- regulation of long-term synaptic potentiation [ISS]
- social behavior [IMP, ISS]
- striatal medium spiny neuron differentiation [ISS]
- synapse assembly [ISS]
- vocal learning [IMP]
- vocalization behavior [IMP, ISS]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Homo sapiens
Affinity Capture-MS
An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner is identified by mass spectrometric methods.
Publication
Dual proteome-scale networks reveal cell-specific remodeling of the human interactome.
Thousands of interactions assemble proteins into modules that impart spatial and functional organization to the cellular proteome. Through affinity-purification mass spectrometry, we have created two proteome-scale, cell-line-specific interaction networks. The first, BioPlex 3.0, results from affinity purification of 10,128 human proteins-half the proteome-in 293T cells and includes 118,162 interactions among 14,586 proteins. The second results from 5,522 immunoprecipitations in HCT116 ... [more]
Cell May. 27, 2021; 184(11);3022-3040.e28 [Pubmed: 33961781]
Quantitative Score
- 0.999999945 [compPASS Score]
Throughput
- High Throughput
Additional Notes
- BioPlex 3.0 HEK 293T cells CompPASS score = 0.999999945, threshold = 0.75. Quantitative scores are calculated by CompPASS-Plus (Huttlin et al. Cell 2015, PMID: 26186194). The 0.75 threshold represents the top 2% of scores in HEK293T.
- This data may be re-scored from BioPlex 1.0 (PMID: 26186194) and BioPlex 2.0 (PMID: 28514442). Only scores from within the same cell line in BioPlex 3.0 (PMID: 33961781) should be compared directly. For comparison of HEK293T and HCT116 interaction networks with relaxed threshold = 0.1, see BioPlex Interactome (https://bioplex.hms.harvard.edu/index.php).
Curated By
- BioGRID