BAIT
ATP6V1B2
ATP6B1B2, ATP6B2, HO57, VATB, VPP3, Vma2
ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2
GO Process (7)
GO Function (2)
GO Component (5)
Gene Ontology Biological Process
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Homo sapiens
PREY
G6PD
G6PD1
glucose-6-phosphate dehydrogenase
GO Process (18)
GO Function (5)
GO Component (8)
Gene Ontology Biological Process
- NADP metabolic process [IDA]
- NADPH regeneration [IMP]
- carbohydrate metabolic process [TAS]
- cellular response to oxidative stress [IMP]
- cholesterol biosynthetic process [IMP]
- cytokine production [IMP]
- erythrocyte maturation [IMP]
- glucose 6-phosphate metabolic process [IDA, IMP]
- glutathione metabolic process [IMP]
- lipid metabolic process [TAS]
- negative regulation of protein glutathionylation [IMP]
- oxidation-reduction process [IMP]
- pentose biosynthetic process [IDA]
- pentose-phosphate shunt [IDA, TAS]
- pentose-phosphate shunt, oxidative branch [IMP]
- ribose phosphate biosynthetic process [IMP]
- small molecule metabolic process [TAS]
- substantia nigra development [IEP]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Homo sapiens
Affinity Capture-MS
An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner is identified by mass spectrometric methods.
Publication
Dual proteome-scale networks reveal cell-specific remodeling of the human interactome.
Thousands of interactions assemble proteins into modules that impart spatial and functional organization to the cellular proteome. Through affinity-purification mass spectrometry, we have created two proteome-scale, cell-line-specific interaction networks. The first, BioPlex 3.0, results from affinity purification of 10,128 human proteins-half the proteome-in 293T cells and includes 118,162 interactions among 14,586 proteins. The second results from 5,522 immunoprecipitations in HCT116 ... [more]
Cell May. 27, 2021; 184(11);3022-3040.e28 [Pubmed: 33961781]
Quantitative Score
- 0.999998621 [compPASS Score]
Throughput
- High Throughput
Additional Notes
- BioPlex 3.0 HEK 293T cells CompPASS score = 0.999998621, threshold = 0.75. Quantitative scores are calculated by CompPASS-Plus (Huttlin et al. Cell 2015, PMID: 26186194). The 0.75 threshold represents the top 2% of scores in HEK293T.
- BioPlex HCT HCT116 cells CompPASS score = 0.999903562, threshold = 0.75. Quantitative scores are calculated by CompPASS-Plus (Huttlin et al. Cell 2015, PMID: 26186194). The 0.75 threshold represents the top 2% of scores in HCT116.
- Only scores from within the same cell line in BioPlex HCT (PMID: 33961781) should be compared directly. For comparison of HEK293T and HCT116 interaction networks with relaxed threshold = 0.1, see BioPlex Interactome (https://bioplex.hms.harvard.edu/index.php).
- This data may be re-scored from BioPlex 1.0 (PMID: 26186194) and BioPlex 2.0 (PMID: 28514442). Only scores from within the same cell line in BioPlex 3.0 (PMID: 33961781) should be compared directly. For comparison of HEK293T and HCT116 interaction networks with relaxed threshold = 0.1, see BioPlex Interactome (https://bioplex.hms.harvard.edu/index.php).
Curated By
- BioGRID