PLXNB1
Gene Ontology Biological Process
- axon guidance [TAS]
- cell migration [NAS]
- intracellular signal transduction [NAS]
- negative regulation of cell adhesion [IDA]
- negative regulation of osteoblast proliferation [ISS]
- neuron projection morphogenesis [ISS]
- ossification involved in bone maturation [ISS]
- positive regulation of Rho GTPase activity [ISS]
- positive regulation of phosphatidylinositol 3-kinase signaling [ISS]
- regulation of cell shape [IDA]
- regulation of cytoskeleton organization [IDA]
- semaphorin-plexin signaling pathway [IDA]
- semaphorin-plexin signaling pathway involved in bone trabecula morphogenesis [ISS]
- signal transduction [TAS]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
ISG20
Gene Ontology Biological Process
- DNA catabolic process, exonucleolytic [IDA]
- RNA catabolic process [IDA]
- RNA phosphodiester bond hydrolysis, exonucleolytic [IDA]
- cell proliferation [TAS]
- cytokine-mediated signaling pathway [TAS]
- defense response to virus [IMP]
- negative regulation of viral genome replication [IMP]
- response to virus [IDA]
- type I interferon signaling pathway [TAS]
Gene Ontology Molecular Function
Affinity Capture-MS
An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner is identified by mass spectrometric methods.
Publication
The BioPlex Network of Human Protein Interactions: Additional Unpublished AP-MS Results (Pre-Publication)
As part of an ongoing effort led by Steve Gygi, Wade Harper, and Ed Huttlin in the Department of Cell Biology at Harvard Medical School, we are systematically profiling the interactions among human proteins using affinity purification mass spectrometry. In this effort, HA-tagged bait proteins obtained from the human ORFeome collection (version 8.1; Marc Vidal) are expressed individually in human ... [more]
Quantitative Score
- 0.916366689 [compPASS Score]
Throughput
- High Throughput
Additional Notes
- BioPlex HCT (unpublished interaction)
- BioPlex HCT HCT116 cells CompPASS score = 0.916366688567437, threshold = 0.362. Quantitative scores are calculated by CompPASS-Plus (Huttlin et al. Cell 2015, PMID: 26186194). The 0.362 threshold represents the top 2% of scores in HCT116.
Related interactions
| Interaction | Experimental Evidence Code | Dataset | Throughput | Score | Curated By | Notes |
|---|---|---|---|---|---|---|
| PLXNB1 ISG20 | Affinity Capture-MS Affinity Capture-MS An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner is identified by mass spectrometric methods. | High | 0.9984 | BioGRID | 3051420 |
Curated By
- BioGRID