BAIT
RHOB
ARH6, ARHB, MST081, MSTP081, RHOH6
ras homolog family member B
GO Process (17)
GO Function (3)
GO Component (7)
Gene Ontology Biological Process
- GTP catabolic process [TAS]
- Rho protein signal transduction [TAS]
- apoptotic process [TAS]
- axon guidance [TAS]
- blood coagulation [TAS]
- cell adhesion [ISS]
- cellular response to hydrogen peroxide [IDA]
- cellular response to ionizing radiation [IDA]
- cytokinesis [IMP]
- endosome to lysosome transport [IDA]
- negative regulation of cell cycle [ISS]
- platelet activation [TAS]
- positive regulation of angiogenesis [ISS]
- positive regulation of apoptotic process [IMP]
- regulation of small GTPase mediated signal transduction [TAS]
- small GTPase mediated signal transduction [TAS]
- transformed cell apoptotic process [ISS]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Homo sapiens
PREY
LRP6
ADCAD2
low density lipoprotein receptor-related protein 6
GO Process (48)
GO Function (12)
GO Component (9)
Gene Ontology Biological Process
- Wnt signaling pathway [IDA, IMP]
- Wnt signaling pathway involved in dorsal/ventral axis specification [IDA]
- Wnt signaling pathway involved in somitogenesis [IBA]
- anterior/posterior pattern specification [IBA]
- axis elongation involved in somitogenesis [IBA]
- bone morphogenesis [IBA]
- bone remodeling [IBA]
- branching involved in mammary gland duct morphogenesis [IBA]
- canonical Wnt signaling pathway [IDA, IMP]
- canonical Wnt signaling pathway involved in neural crest cell differentiation [IC]
- canonical Wnt signaling pathway involved in regulation of cell proliferation [IC]
- cellular response to cholesterol [IMP]
- cerebellum morphogenesis [IBA]
- cerebral cortex development [IBA]
- convergent extension [IBA]
- embryonic camera-type eye morphogenesis [IBA]
- embryonic limb morphogenesis [IBA]
- embryonic pattern specification [IBA]
- embryonic retina morphogenesis in camera-type eye [IBA]
- external genitalia morphogenesis [IBA]
- face morphogenesis [IBA]
- gastrulation with mouth forming second [IBA]
- midbrain development [IBA]
- midbrain-hindbrain boundary development [IBA]
- negative regulation of protein kinase activity [IMP]
- negative regulation of protein phosphorylation [IMP]
- negative regulation of protein serine/threonine kinase activity [IDA]
- negative regulation of smooth muscle cell apoptotic process [IMP]
- neural crest cell differentiation [IDA]
- neural crest formation [IDA]
- neural tube closure [IBA]
- odontogenesis of dentin-containing tooth [IBA]
- palate development [IBA]
- pericardium morphogenesis [IBA]
- positive regulation of Wnt signaling pathway involved in dorsal/ventral axis specification [IDA]
- positive regulation of canonical Wnt signaling pathway [IDA]
- positive regulation of cell cycle [IMP]
- positive regulation of sequence-specific DNA binding transcription factor activity [IDA]
- positive regulation of transcription from RNA polymerase II promoter [IDA]
- positive regulation of transcription, DNA-templated [IMP]
- primitive streak formation [IBA]
- receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport [IBA]
- regulation of fat cell differentiation [IBA]
- regulation of ossification [IBA]
- synaptic transmission [IBA]
- thalamus development [IBA]
- toxin transport [IMP]
- trachea cartilage morphogenesis [IBA]
Gene Ontology Molecular Function- Wnt-activated receptor activity [IBA]
- Wnt-protein binding [IPI]
- apolipoprotein binding [IBA]
- coreceptor activity involved in Wnt signaling pathway [IDA]
- frizzled binding [IPI]
- identical protein binding [IPI]
- kinase inhibitor activity [IMP]
- low-density lipoprotein receptor activity [IDA]
- protein binding [IPI]
- protein homodimerization activity [IPI]
- receptor binding [IPI]
- toxin transporter activity [IMP]
- Wnt-activated receptor activity [IBA]
- Wnt-protein binding [IPI]
- apolipoprotein binding [IBA]
- coreceptor activity involved in Wnt signaling pathway [IDA]
- frizzled binding [IPI]
- identical protein binding [IPI]
- kinase inhibitor activity [IMP]
- low-density lipoprotein receptor activity [IDA]
- protein binding [IPI]
- protein homodimerization activity [IPI]
- receptor binding [IPI]
- toxin transporter activity [IMP]
Gene Ontology Cellular Component
Homo sapiens
Affinity Capture-MS
An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner is identified by mass spectrometric methods.
Publication
Mapping the proximity interaction network of the Rho-family GTPases reveals signalling pathways and regulatory mechanisms.
Guanine nucleotide exchange factors (RhoGEFs) and GTPase-activating proteins (RhoGAPs) coordinate the activation state of the Rho family of GTPases for binding to effectors. Here, we exploited proximity-dependent biotinylation to systematically define the Rho family proximity interaction network from 28 baits to produce 9,939 high-confidence proximity interactions in two cell lines. Exploiting the nucleotide states of Rho GTPases, we revealed the ... [more]
Nat. Cell Biol. Dec. 23, 2019; (); [Pubmed: 31871319]
Throughput
- Low Throughput
Additional Notes
- AvgP greater or equal to 0.95 assessed by SAINT express
- BioID
- RHOB-G14V active mutant bait, interaction in Hela cells
Related interactions
| Interaction | Experimental Evidence Code | Dataset | Throughput | Score | Curated By | Notes |
|---|---|---|---|---|---|---|
| RHOB LRP6 | Proximity Label-MS Proximity Label-MS An interaction is inferred when a bait-enzyme fusion protein selectively modifies a vicinal protein with a diffusible reactive product, followed by affinity capture of the modified protein and identification by mass spectrometric methods. | High | 20 | BioGRID | 3004178 |
Curated By
- BioGRID