BAIT
SNX12
sorting nexin 12
GO Process (8)
GO Function (3)
GO Component (4)
Gene Ontology Biological Process
- endocytosis [IBA]
- negative regulation of early endosome to late endosome transport [IDA]
- negative regulation of gene expression [IMP]
- negative regulation of protein catabolic process [IDA]
- negative regulation of protein processing [IDA]
- negative regulation of protein transport [IDA]
- regulation of endocytosis [IMP]
- vesicle organization [IBA]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Homo sapiens
PREY
PTPN23
HD-PTP, HDPTP, PTP-TD14
protein tyrosine phosphatase, non-receptor type 23
GO Process (7)
GO Function (3)
GO Component (7)
Gene Ontology Biological Process
- cilium morphogenesis [IMP]
- negative regulation of epithelial cell migration [IMP]
- peptidyl-tyrosine dephosphorylation [IMP]
- positive regulation of adherens junction organization [IMP]
- positive regulation of early endosome to late endosome transport [IMP]
- positive regulation of homophilic cell adhesion [IMP]
- ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway [IMP]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Homo sapiens
Affinity Capture-MS
An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner is identified by mass spectrometric methods.
Publication
OpenCell: Endogenous tagging for the cartography of human cellular organization.
Elucidating the wiring diagram of the human cell is a central goal of the postgenomic era. We combined genome engineering, confocal live-cell imaging, mass spectrometry, and data science to systematically map the localization and interactions of human proteins. Our approach provides a data-driven description of the molecular and spatial networks that organize the proteome. Unsupervised clustering of these networks delineates ... [more]
Science Dec. 11, 2021; 375(6585);eabi6983 [Pubmed: 35271311]
Throughput
- High Throughput
Additional Notes
- Bait generated from library of CRISPR-edited human embryonic kidney (HEK) 293T cell lines harboring fluorescent tags on individual proteins
Curated By
- BioGRID