BAIT
SNX9
SDP1, SH3PX1, SH3PXD3A, WISP, RP11-266C7.10-001
sorting nexin 9
GO Process (13)
GO Function (6)
GO Component (9)
Gene Ontology Biological Process
- cleavage furrow formation [IMP]
- endocytosis [IMP]
- endosomal transport [IMP]
- intracellular protein transport [IMP]
- lipid tube assembly [IDA]
- membrane tubulation [IDA]
- mitotic cytokinesis [IMP]
- positive regulation of GTPase activity [IDA]
- positive regulation of membrane protein ectodomain proteolysis [IDA]
- positive regulation of protein kinase activity [IDA]
- positive regulation of protein oligomerization [IDA]
- receptor-mediated endocytosis [IMP]
- vesicle organization [IBA]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Homo sapiens
PREY
PCGF3
DONG1, RNF3, RNF3A
polycomb group ring finger 3
GO Process (0)
GO Function (1)
GO Component (3)
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Homo sapiens
Affinity Capture-MS
An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner is identified by mass spectrometric methods.
Publication
OpenCell: Endogenous tagging for the cartography of human cellular organization.
Elucidating the wiring diagram of the human cell is a central goal of the postgenomic era. We combined genome engineering, confocal live-cell imaging, mass spectrometry, and data science to systematically map the localization and interactions of human proteins. Our approach provides a data-driven description of the molecular and spatial networks that organize the proteome. Unsupervised clustering of these networks delineates ... [more]
Science Dec. 11, 2021; 375(6585);eabi6983 [Pubmed: 35271311]
Throughput
- High Throughput
Additional Notes
- Bait generated from library of CRISPR-edited human embryonic kidney (HEK) 293T cell lines harboring fluorescent tags on individual proteins
Curated By
- BioGRID