BAIT
SRP54
signal recognition particle 54kDa
GO Process (9)
GO Function (8)
GO Component (5)
Gene Ontology Biological Process
- GTP catabolic process [IDA]
- SRP-dependent cotranslational protein targeting to membrane [IC, TAS]
- SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition [ISS]
- SRP-dependent cotranslational protein targeting to membrane, translocation [ISS]
- cellular protein metabolic process [TAS]
- gene expression [TAS]
- protein targeting to ER [IMP]
- response to drug [IDA]
- translation [TAS]
Gene Ontology Molecular Function
Homo sapiens
PREY
ALDH5A1
SSADH, SSDH
aldehyde dehydrogenase 5 family, member A1
GO Process (16)
GO Function (4)
GO Component (2)
Gene Ontology Biological Process
- acetate metabolic process [ISS]
- central nervous system development [IMP]
- galactosylceramide metabolic process [ISS]
- gamma-aminobutyric acid catabolic process [IDA, IMP]
- glucose metabolic process [ISS]
- glutamate metabolic process [ISS]
- glutamine metabolic process [ISS]
- glutathione metabolic process [ISS]
- glycerophospholipid metabolic process [ISS]
- neurotransmitter catabolic process [ISS]
- neurotransmitter secretion [TAS]
- protein homotetramerization [IDA]
- respiratory electron transport chain [ISS]
- short-chain fatty acid metabolic process [ISS]
- succinate metabolic process [ISS]
- synaptic transmission [TAS]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Homo sapiens
Affinity Capture-MS
An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner is identified by mass spectrometric methods.
Publication
OpenCell: Endogenous tagging for the cartography of human cellular organization.
Elucidating the wiring diagram of the human cell is a central goal of the postgenomic era. We combined genome engineering, confocal live-cell imaging, mass spectrometry, and data science to systematically map the localization and interactions of human proteins. Our approach provides a data-driven description of the molecular and spatial networks that organize the proteome. Unsupervised clustering of these networks delineates ... [more]
Science Dec. 11, 2021; 375(6585);eabi6983 [Pubmed: 35271311]
Throughput
- High Throughput
Additional Notes
- Bait generated from library of CRISPR-edited human embryonic kidney (HEK) 293T cell lines harboring fluorescent tags on individual proteins
Curated By
- BioGRID