BAIT
ATG5
2010107M05Rik, 3110067M24Rik, AW319544, Apg5l, Atg5l, C88337, Paddy
autophagy related 5
GO Process (23)
GO Function (2)
GO Component (7)
Gene Ontology Biological Process
- C-terminal protein lipidation [IBA]
- autophagic vacuole assembly [IMP]
- autophagy [IMP]
- blood vessel remodeling [IMP]
- cellular response to nitrogen starvation [IBA]
- heart contraction [IMP]
- mitochondrion degradation [IBA]
- negative regulation of apoptotic process [IMP]
- negative regulation of histone H4-K16 acetylation [IMP]
- negative regulation of protein ubiquitination [IMP]
- negative stranded viral RNA replication [IMP]
- nucleophagy [IBA]
- otolith development [IMP]
- positive regulation of mucus secretion [IMP]
- post-translational protein modification [IDA]
- regulation of cilium assembly [IMP]
- regulation of cytokine secretion involved in immune response [IMP]
- regulation of reactive oxygen species metabolic process [IMP]
- regulation of release of sequestered calcium ion into cytosol [IMP]
- response to drug [IMP]
- response to fungus [IMP]
- vasodilation [IMP]
- ventricular cardiac muscle cell development [IMP]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Mus musculus
PREY
CAV1
Cav, Cav-1
caveolin 1, caveolae protein
GO Process (89)
GO Function (15)
GO Component (28)
Gene Ontology Biological Process
- MAPK cascade [IMP]
- T cell costimulation [ISO]
- angiogenesis [IGI]
- apoptotic signaling pathway [ISO]
- calcium ion homeostasis [IMP]
- calcium ion transport [IMP]
- caveola assembly [IMP, ISO]
- caveolin-mediated endocytosis [ISO]
- cellular calcium ion homeostasis [IMP, ISO]
- cellular response to hyperoxia [ISO]
- cellular response to mechanical stimulus [ISO]
- cellular response to transforming growth factor beta stimulus [IMP]
- cellular senescence [ISO]
- cholesterol efflux [ISO]
- cholesterol homeostasis [IMP]
- cytosolic calcium ion homeostasis [ISO]
- endocytosis [TAS]
- inactivation of MAPK activity [IMP]
- lactation [IMP]
- lipid storage [IMP]
- maintenance of protein location in cell [ISO]
- mammary gland development [IMP]
- mammary gland involution [IMP]
- membrane depolarization [IMP]
- microtubule polymerization [ISO]
- negative regulation of BMP signaling pathway [ISO]
- negative regulation of ERK1 and ERK2 cascade [ISO]
- negative regulation of JAK-STAT cascade [IDA, IGI, IMP]
- negative regulation of MAP kinase activity [IMP]
- negative regulation of MAPK cascade [IMP]
- negative regulation of anoikis [IMP, ISO]
- negative regulation of canonical Wnt signaling pathway [IDA]
- negative regulation of cation channel activity [ISO]
- negative regulation of cell proliferation [IMP]
- negative regulation of cytokine-mediated signaling pathway [IMP]
- negative regulation of endothelial cell proliferation [IMP, ISO]
- negative regulation of epithelial cell differentiation [IMP]
- negative regulation of muscle cell apoptotic process [ISO]
- negative regulation of neuron differentiation [ISO]
- negative regulation of nitric oxide biosynthetic process [IMP]
- negative regulation of nitric-oxide synthase activity [IMP]
- negative regulation of peptidyl-serine phosphorylation [ISO]
- negative regulation of peptidyl-tyrosine autophosphorylation [ISO]
- negative regulation of pinocytosis [ISO]
- negative regulation of potassium ion transmembrane transport [ISO]
- negative regulation of protein binding [ISO]
- negative regulation of protein tyrosine kinase activity [ISO]
- negative regulation of protein ubiquitination [IMP, ISO]
- negative regulation of signal transduction [IDA]
- negative regulation of smooth muscle cell proliferation [ISO]
- negative regulation of transcription from RNA polymerase II promoter [IDA]
- negative regulation of tyrosine phosphorylation of Stat5 protein [IDA, IMP]
- nitric oxide homeostasis [IMP]
- positive regulation of calcium ion transport into cytosol [IDA]
- positive regulation of canonical Wnt signaling pathway [ISO]
- positive regulation of endocytosis [ISO]
- positive regulation of endothelial cell proliferation [ISO]
- positive regulation of extrinsic apoptotic signaling pathway [ISO]
- positive regulation of intrinsic apoptotic signaling pathway [ISO]
- positive regulation of metalloenzyme activity [IMP]
- positive regulation of microtubule polymerization [ISO]
- positive regulation of peptidase activity [IMP]
- positive regulation of peptidyl-serine phosphorylation [ISO]
- positive regulation of signal transduction [ISO]
- positive regulation of vasoconstriction [IMP, ISO]
- protein homooligomerization [IDA]
- protein localization [IMP]
- protein oligomerization [IDA]
- receptor internalization involved in canonical Wnt signaling pathway [ISO]
- regulation of blood coagulation [ISO]
- regulation of fatty acid metabolic process [IMP]
- regulation of inward rectifier potassium channel activity [ISO]
- regulation of membrane repolarization during action potential [ISO]
- regulation of peptidase activity [IMP]
- regulation of smooth muscle contraction [IMP]
- regulation of the force of heart contraction [IMP]
- regulation of the force of heart contraction by chemical signal [IGI]
- response to calcium ion [IDA]
- response to estrogen [IDA, ISO]
- response to hypoxia [IMP]
- response to ischemia [IMP]
- response to mechanical stimulus [ISO]
- response to progesterone [ISO]
- skeletal muscle tissue development [IMP]
- triglyceride metabolic process [IMP]
- vasculogenesis [IMP]
- vasoconstriction [IMP]
- vesicle organization [ISO]
- wound healing [ISO]
Gene Ontology Molecular Function- MDM2/MDM4 family protein binding [ISO]
- RNA polymerase I transcription factor binding [ISO]
- SNARE binding [ISO]
- enzyme binding [ISO]
- identical protein binding [ISO]
- inward rectifier potassium channel inhibitor activity [ISO]
- ion channel binding [ISO]
- kinase binding [ISO]
- nitric-oxide synthase binding [ISO]
- peptidase activator activity [IMP]
- protein binding [IPI]
- protein kinase binding [ISO]
- receptor binding [ISO]
- structural molecule activity [ISO]
- syntaxin binding [ISO]
- MDM2/MDM4 family protein binding [ISO]
- RNA polymerase I transcription factor binding [ISO]
- SNARE binding [ISO]
- enzyme binding [ISO]
- identical protein binding [ISO]
- inward rectifier potassium channel inhibitor activity [ISO]
- ion channel binding [ISO]
- kinase binding [ISO]
- nitric-oxide synthase binding [ISO]
- peptidase activator activity [IMP]
- protein binding [IPI]
- protein kinase binding [ISO]
- receptor binding [ISO]
- structural molecule activity [ISO]
- syntaxin binding [ISO]
Gene Ontology Cellular Component
- Golgi apparatus [IDA, ISO]
- Golgi membrane [ISO]
- acrosomal membrane [IDA]
- apical plasma membrane [ISO]
- basal plasma membrane [ISO]
- basolateral plasma membrane [ISO]
- caveola [IDA, ISO, TAS]
- cell [IMP]
- cell cortex [IDA]
- cell surface [ISO]
- cilium [IDA]
- cytoplasm [ISO]
- cytoplasmic vesicle [ISO]
- cytosol [ISO]
- endoplasmic reticulum [IDA, ISO]
- endosome [ISO]
- focal adhesion [ISO]
- integral component of membrane [IDA]
- integral component of plasma membrane [IDA]
- intracellular [IMP, ISO]
- lipid particle [ISO]
- membrane [IDA]
- membrane raft [IDA, ISO]
- mitochondrion [ISO]
- perinuclear region of cytoplasm [IDA, ISO]
- peroxisomal membrane [ISO]
- plasma membrane [IDA, ISO]
- protein complex [IPI, ISO]
Mus musculus
Affinity Capture-RNA
An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and associated RNA species identified by Northern blot, RT-PCR, affinity labeling, sequencing, or microarray analysis.
Publication
The ATG5 interactome links clathrin-mediated vesicular trafficking with the autophagosome assembly machinery.
Autophagosome formation involves the sequential actions of conserved ATG proteins to coordinate the lipidation of the ubiquitin-like modifier Atg8-family proteins at the nascent phagophore membrane. Although the molecular steps driving this process are well understood, the source of membranes for the expanding phagophore and their mode of delivery are only now beginning to be revealed. Here, we have used quantitative ... [more]
Autophagy Rep Apr. 23, 2022; 1(1);88-118 [Pubmed: 35449600]
Throughput
- Low Throughput
Curated By
- BioGRID