BAIT
LRRC4C
6430556C10Rik, NGL-1
leucine rich repeat containing 4C
GO Process (1)
GO Function (1)
GO Component (2)
Gene Ontology Biological Process
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Mus musculus
PREY
GRM5
6430542K11Rik, AI850523, Glu5R, Gprc1e, mGluR5, mGluR5b
glutamate receptor, metabotropic 5
GO Process (15)
GO Function (5)
GO Component (10)
Gene Ontology Biological Process
- G-protein coupled glutamate receptor signaling pathway [IBA, ISO]
- activation of MAPKKK activity [ISO]
- cognition [ISO]
- desensitization of G-protein coupled receptor protein signaling pathway [ISO]
- learning [IMP]
- locomotory behavior [IGI, IMP]
- negative regulation of locomotion [ISO]
- phospholipase C-activating G-protein coupled glutamate receptor signaling pathway [TAS]
- positive regulation of long-term neuronal synaptic plasticity [ISO]
- protein kinase C-activating G-protein coupled receptor signaling pathway [IBA, ISO]
- protein phosphorylation [ISO]
- regulation of long-term neuronal synaptic plasticity [IMP]
- regulation of synaptic transmission, glutamatergic [IBA]
- regulation of transcription, DNA-templated [ISO]
- synaptic transmission [ISO]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Mus musculus
Proximity Label-MS
An interaction is inferred when a bait-enzyme fusion protein selectively modifies a vicinal protein with a diffusible reactive product, followed by affinity capture of the modified protein and identification by mass spectrometric methods.
Publication
Neuron-specific protein network mapping of autism risk genes identifies shared biological mechanisms and disease-relevant pathologies.
There are hundreds of risk genes associated with autism spectrum disorder (ASD), but signaling networks at the protein level remain unexplored. We use neuron-specific proximity-labeling proteomics (BioID2) to identify protein-protein interaction (PPI) networks for 41 ASD risk genes. Neuron-specific PPI networks, including synaptic transmission proteins, are disrupted by de novo missense variants. The PPI network map reveals convergent pathways, including ... [more]
Cell Rep Nov. 22, 2022; 41(8);111678 [Pubmed: 36417873]
Quantitative Score
- 0.382238324 [Relative Biotinylation Score]
Throughput
- High Throughput
Additional Notes
- BioID experiment
- The scores are relative biotinylation enrichment scores (calculated as a percentage of the abundance fold change of the highest biotinylated prey protein)
- The statistical cut-offs for the prey proteins are based on adjusted t-test p-value and significance B scores of less than 0.05, by comparing average abundances of prey proteins between the Bait-BioID samples and the luciferase-BioID control
Curated By
- BioGRID