BAIT
PRKAR1B
AI385716, RIbeta
protein kinase, cAMP dependent regulatory, type I beta
GO Process (6)
GO Function (4)
GO Component (2)
Gene Ontology Biological Process
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Mus musculus
PREY
SNAP25
Bdr, GENA70, SNAP-25, SUP, sp, RP23-142F14.2
synaptosomal-associated protein 25
GO Process (13)
GO Function (9)
GO Component (28)
Gene Ontology Biological Process
- calcium ion-dependent exocytosis of neurotransmitter [ISO]
- endosomal transport [ISO]
- long-term memory [ISO]
- long-term synaptic potentiation [IMP]
- neurotransmitter secretion [IMP]
- positive regulation of hormone secretion [ISO]
- potassium ion transmembrane transport [ISO]
- regulation of establishment of protein localization [IMP]
- regulation of ion transmembrane transport [ISO]
- regulation of neuron projection development [ISO]
- sleep [ISO]
- synaptic vesicle fusion to presynaptic membrane [IBA]
- synaptic vesicle priming [IBA]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
- BLOC-1 complex [ISO]
- SNARE complex [ISO]
- actin cytoskeleton [ISO]
- axon [ISO]
- axonal growth cone [ISO]
- cell [IMP]
- cytoplasm [IDA, ISO]
- cytosol [ISO]
- endosome [ISO]
- filopodium [ISO]
- growth cone [ISO]
- intracellular organelle [ISO]
- lamellipodium [ISO]
- membrane [IDA]
- membrane raft [ISO]
- myelin sheath [IDA]
- neuron projection [ISO]
- neuronal cell body [ISO]
- perinuclear region of cytoplasm [IDA]
- plasma membrane [ISO, TAS]
- synapse [IDA]
- synaptobrevin 2-SNAP-25-syntaxin-1a complex [ISO]
- synaptobrevin 2-SNAP-25-syntaxin-1a-complexin I complex [IDA, ISO]
- synaptobrevin 2-SNAP-25-syntaxin-1a-complexin II complex [ISO]
- terminal bouton [ISO]
- trans-Golgi network [IDA]
- vesicle [ISO]
- voltage-gated potassium channel complex [ISO]
Mus musculus
Proximity Label-MS
An interaction is inferred when a bait-enzyme fusion protein selectively modifies a vicinal protein with a diffusible reactive product, followed by affinity capture of the modified protein and identification by mass spectrometric methods.
Publication
Neuron-specific protein network mapping of autism risk genes identifies shared biological mechanisms and disease-relevant pathologies.
There are hundreds of risk genes associated with autism spectrum disorder (ASD), but signaling networks at the protein level remain unexplored. We use neuron-specific proximity-labeling proteomics (BioID2) to identify protein-protein interaction (PPI) networks for 41 ASD risk genes. Neuron-specific PPI networks, including synaptic transmission proteins, are disrupted by de novo missense variants. The PPI network map reveals convergent pathways, including ... [more]
Cell Rep Nov. 22, 2022; 41(8);111678 [Pubmed: 36417873]
Quantitative Score
- 0.425549259 [Relative Biotinylation Score]
Throughput
- High Throughput
Additional Notes
- BioID experiment
- The scores are relative biotinylation enrichment scores (calculated as a percentage of the abundance fold change of the highest biotinylated prey protein)
- The statistical cut-offs for the prey proteins are based on adjusted t-test p-value and significance B scores of less than 0.05, by comparing average abundances of prey proteins between the Bait-BioID samples and the luciferase-BioID control
Curated By
- BioGRID