An interaction is inferred when a bait-enzyme fusion protein selectively modifies a vicinal protein with a diffusible reactive product, followed by affinity capture of the modified protein and identification by mass spectrometric methods.

Publication

Proximity-dependent biotin identification (BioID) reveals a dynamic LSD1-CoREST interactome during embryonic stem cell differentiation.

Barnes CE, English DM, Broderick M, Collins MO, Cowley SM

Lysine specific demethylase 1 (LSD1) regulates gene expression as part of the CoREST complex, along with co-repressor of REST (CoREST) and histone deacetylase 1 (HDAC1). CoREST is recruited to specific genomic loci by core components and numerous transient interactions with chromatin-associated factors and transcription factors. We hypothesise that many of these weaker and transient associations may be difficult to identify ... [more]

Mol Omics Jan. 17, 2022; 18(1);31-44 [Pubmed: 34709266]

Throughput

High Throughput

Additional Notes

BioID
HEK293T cells

Curated By

BioGRID

Interaction Summary

RCOR1

Gene Ontology Biological Process

Gene Ontology Molecular Function

RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription [IDA]protein binding [IPI]transcription regulatory region DNA binding [IDA]

Gene Ontology Cellular Component

VCPIP1