Affinity Capture-RNA

An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and associated RNA species identified by Northern blot, RT-PCR, affinity labeling, sequencing, or microarray analysis.

Publication

SOX21-AS1 activated by STAT6 promotes pancreatic cancer progression via up-regulation of SOX21.

Yu D, Zhao Z, Wang L, Qiao S, Yang Z, Wen Q, Zhu G

Pancreatic cancer (PC) is a highly malignant tumor which threatens human's health. Long non-coding RNAs (lncRNAs) are implicated in many cancers, including PC, but their mechanisms in PC have not yet been entirely clarified. We focused on revealing the potential function of lncRNA SOX21-AS1 in PC.Functional assays assessed SOX21-AS1 function on PC progression. Bioinformatics analysis, along with mechanism assays were ... [more]

J Transl Med Nov. 05, 2022; 20(1);511 [Pubmed: 36335356]

Throughput

  • Low Throughput

Related interactions

InteractionExperimental Evidence CodeDatasetThroughputScoreCurated ByNotes
SOX21-AS1 USP10
Protein-RNA
Protein-RNA

An interaction is detected between and protein and an RNA in vitro.

Low/High-BioGRID
3559745

Curated By

  • BioGRID