RLIM
Gene Ontology Biological Process
Gene Ontology Molecular Function
Gene Ontology Cellular Component
LDB1
Gene Ontology Biological Process
- histone H3-K4 acetylation [ISS]
- multicellular organismal development [NAS]
- negative regulation of erythrocyte differentiation [ISS]
- negative regulation of transcription, DNA-templated [IDA]
- neuron differentiation [ISS]
- positive regulation of hemoglobin biosynthetic process [ISS]
- positive regulation of transcription from RNA polymerase II promoter [IMP, ISS]
- regulation of DNA-templated transcription, elongation [ISS]
- regulation of transcription, DNA-templated [NAS]
- transcription, DNA-templated [NAS]
- transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery [ISS]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Biochemical Activity (Ubiquitination)
An interaction is inferred from the biochemical effect of one protein upon another, for example, GTP-GDP exchange activity or phosphorylation of a substrate by a kinase. The bait protein executes the activity on the substrate hit protein. A Modification value is recorded for interactions of this type with the possible values Phosphorylation, Ubiquitination, Sumoylation, Dephosphorylation, Methylation, Prenylation, Acetylation, Deubiquitination, Proteolytic Processing, Glucosylation, Nedd(Rub1)ylation, Deacetylation, No Modification, Demethylation.
Publication
Ubiquitination-dependent cofactor exchange on LIM homeodomain transcription factors.
The interactions of distinct cofactor complexes with transcription factors are decisive determinants for the regulation of gene expression. Depending on the bound cofactor, transcription factors can have either repressing or transactivating activities. To allow a switch between these different states, regulated cofactor exchange has been proposed; however, little is known about the molecular mechanisms that are involved in this process. ... [more]
Throughput
- Low Throughput
Additional Notes
- E2: UbcH5
Related interactions
| Interaction | Experimental Evidence Code | Dataset | Throughput | Score | Curated By | Notes |
|---|---|---|---|---|---|---|
| RLIM LDB1 | Affinity Capture-Western Affinity Capture-Western An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner identified by Western blot with a specific polyclonal antibody or second epitope tag. This category is also used if an interacting protein is visualized directly by dye stain or radioactivity. Note that this differs from any co-purification experiment involving affinity capture in that the co-purification experiment involves at least one extra purification step to get rid of potential contaminating proteins. | Low | - | BioGRID | - | |
| LDB1 RLIM | Affinity Capture-Western Affinity Capture-Western An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner identified by Western blot with a specific polyclonal antibody or second epitope tag. This category is also used if an interacting protein is visualized directly by dye stain or radioactivity. Note that this differs from any co-purification experiment involving affinity capture in that the co-purification experiment involves at least one extra purification step to get rid of potential contaminating proteins. | Low | - | BioGRID | 425744 |
Curated By
- BioGRID