ATG8
Gene Ontology Biological Process
- CVT pathway [IMP]
- ER to Golgi vesicle-mediated transport [IGI, IMP, IPI]
- autophagic vacuole assembly [IMP]
- cellular protein complex localization [IMP]
- late nucleophagy [IMP]
- membrane fusion [IDA, IMP]
- mitochondrion degradation [IMP]
- piecemeal microautophagy of nucleus [IMP]
- protein targeting to vacuole involved in autophagy [IMP]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
CDC39
Gene Ontology Biological Process
- nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay [IDA, IGI, IMP]
- nuclear-transcribed mRNA poly(A) tail shortening [IDA]
- positive regulation of transcription elongation from RNA polymerase II promoter [IDA, IPI]
- pseudohyphal growth [IMP]
- regulation of cell cycle [IMP]
- regulation of transcription from RNA polymerase II promoter [IPI]
- response to pheromone involved in conjugation with cellular fusion [IMP]
- transcription elongation from RNA polymerase II promoter [IGI, IMP]
Proximity Label-MS
An interaction is inferred when a bait-enzyme fusion protein selectively modifies a vicinal protein with a diffusible reactive product, followed by affinity capture of the modified protein and identification by mass spectrometric methods.
Publication
An APEX2-based proximity-dependent biotinylation assay with temporal specificity to study protein interactions during autophagy in the yeast Saccharomyces cerevisiae.
Autophagosome biogenesis is a complex process orchestrated by dynamic interactions between Atg (autophagy-related) proteins and characterized by the turnover of specific cargoes, which can differ over time and depending on how autophagy is stimulated. Proteomic analyses are central to uncover protein-protein interaction networks and when combined with proximity-dependent biotinylation or proximity labeling (PL) approaches, they also permit to detect transient ... [more]
Throughput
- High Throughput
Additional Notes
- Atg8 interactors upon 1 h of nitrogen starvation
Related interactions
| Interaction | Experimental Evidence Code | Dataset | Throughput | Score | Curated By | Notes |
|---|---|---|---|---|---|---|
| CDC39 ATG8 | Negative Genetic Negative Genetic Mutations/deletions in separate genes, each of which alone causes a minimal phenotype, but when combined in the same cell results in a more severe fitness defect or lethality under a given condition. This term is reserved for high or low throughput studies with scores. | High | -0.2143 | BioGRID | 1963802 | |
| ATG8 CDC39 | Negative Genetic Negative Genetic Mutations/deletions in separate genes, each of which alone causes a minimal phenotype, but when combined in the same cell results in a more severe fitness defect or lethality under a given condition. This term is reserved for high or low throughput studies with scores. | High | -0.148 | BioGRID | 2027609 |
Curated By
- BioGRID