LAMA5
Gene Ontology Biological Process
- angiogenesis [NAS]
- cell differentiation [NAS]
- cell migration [IDA]
- cell proliferation [NAS]
- cell recognition [NAS]
- cytoskeleton organization [NAS]
- embryo development [NAS]
- endothelial cell differentiation [NAS]
- extracellular matrix disassembly [TAS]
- extracellular matrix organization [TAS]
- focal adhesion assembly [NAS]
- integrin-mediated signaling pathway [IMP]
- substrate adhesion-dependent cell spreading [IDA]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
ALB
Gene Ontology Biological Process
- bile acid and bile salt transport [TAS]
- bile acid metabolic process [TAS]
- blood coagulation [TAS]
- cellular response to starvation [IDA]
- hemolysis by symbiont of host erythrocytes [IDA]
- lipoprotein metabolic process [TAS]
- maintenance of mitochondrion location [IDA]
- negative regulation of apoptotic process [IDA]
- negative regulation of programmed cell death [NAS]
- platelet activation [TAS]
- platelet degranulation [TAS]
- retina homeostasis [IEP]
- small molecule metabolic process [TAS]
- sodium-independent organic anion transport [TAS]
- transmembrane transport [TAS]
- transport [TAS]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Cross-Linking-MS (XL-MS)
An interaction is detected between two proteins using chemically reactive or photo-activatable cross-linking reagents that covalently link amino acids in close proximity, followed by mass spectrometry analysis to identify the linked peptides (reviewed in PMID 37406423, 37104977). Experiments may be carried with live cells or cell lysates in which all proteins are expressed at endogenous levels (e.g. PMID 34349018, 35235311) or with recombinant proteins (e.g., PMID 28537071).
Publication
Cross-Linking Mass Spectrometry Uncovers Interactions Between High-Density Lipoproteins and the SARS-CoV-2 Spike Glycoprotein.
High-density lipoprotein (HDL) levels are reduced in patients with coronavirus disease 2019 (COVID-19), and the extent of this reduction is associated with poor clinical outcomes. While lipoproteins are known to play a key role during the life cycle of the hepatitis C virus, their influence on coronavirus (CoV) infections is poorly understood. In this study, we utilize cross-linking mass spectrometry ... [more]
Throughput
- High Throughput
Additional Notes
- XL-MS protein interactions identified in plasma isolated from patients in intensive care with confirmed COVID-19 (Table S1).
Curated By
- BioGRID