BSG
Gene Ontology Biological Process
- blood coagulation [TAS]
- cell surface receptor signaling pathway [TAS]
- cellular metabolic process [TAS]
- extracellular matrix disassembly [TAS]
- extracellular matrix organization [TAS]
- leukocyte migration [TAS]
- protein targeting to plasma membrane [ISS]
- pyruvate metabolic process [TAS]
- small molecule metabolic process [TAS]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
EPHA5
Gene Ontology Biological Process
- axon guidance [ISS]
- cAMP-mediated signaling [ISS]
- ephrin receptor signaling pathway [ISS]
- hippocampus development [ISS]
- neuron development [IEP]
- positive regulation of CREB transcription factor activity [ISS]
- regulation of Rac GTPase activity [ISS]
- regulation of actin cytoskeleton organization [ISS]
- regulation of insulin secretion involved in cellular response to glucose stimulus [ISS]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Proximity Label-MS
An interaction is inferred when a bait-enzyme fusion protein selectively modifies a vicinal protein with a diffusible reactive product, followed by affinity capture of the modified protein and identification by mass spectrometric methods.
Publication
Extracellular proximal interaction profiling by cell surface-targeted TurboID reveals LDLR as a partner of liganded EGFR.
Plasma membrane proteins play pivotal roles in receiving and transducing signals from other cells and from the environment and are vital for cellular functionality. Enzyme-based, proximity-dependent approaches, such as biotin identification (BioID), combined with mass spectrometry have begun to illuminate the landscape of proximal protein interactions within intracellular compartments. To extend the potential of these approaches to study the extracellular ... [more]
Throughput
- High Throughput
Additional Notes
- Extracellular TurboID (ecTurboID)
- High confidence interactions had a 1% BFDR and a minimum of two spectral counts.
Related interactions
| Interaction | Experimental Evidence Code | Dataset | Throughput | Score | Curated By | Notes |
|---|---|---|---|---|---|---|
| EPHA5 BSG | Affinity Capture-MS Affinity Capture-MS An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner is identified by mass spectrometric methods. | High | 0.04 | BioGRID | 3505970 |
Curated By
- BioGRID