BAIT
HNRNPD
Auf1, Hnrpd
heterogeneous nuclear ribonucleoprotein D
GO Process (5)
GO Function (4)
GO Component (4)
Gene Ontology Biological Process
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Mus musculus
PREY
PRPS1
2310010D17Rik, C76571, C76678, PRS-I, Prps-1, RP23-137E3.3
phosphoribosyl pyrophosphate synthetase 1
GO Process (9)
GO Function (8)
GO Component (2)
Gene Ontology Biological Process
- 5-phosphoribose 1-diphosphate biosynthetic process [ISO]
- AMP biosynthetic process [ISO]
- hypoxanthine biosynthetic process [ISO]
- nervous system development [ISO]
- nucleotide biosynthetic process [ISO]
- purine nucleobase metabolic process [ISO]
- purine nucleotide biosynthetic process [ISO]
- ribose phosphate metabolic process [ISO]
- urate biosynthetic process [ISO]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Mus musculus
Affinity Capture-RNA
An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and associated RNA species identified by Northern blot, RT-PCR, affinity labeling, sequencing, or microarray analysis.
Publication
Short-lived AUF1 p42-binding mRNAs of RANKL and BCL6 have two distinct instability elements each.
Regulation of mRNA stability by RNA-protein interactions contributes significantly to quantitative aspects of gene expression. We have identified potential mRNA targets of the AU-rich element binding protein AUF1. Myc-tagged AUF1 p42 was induced in mouse NIH/3T3 cells and RNA-protein complexes isolated using anti-myc tag antibody beads. Bound mRNAs were analyzed with Affymetrix microarrays. We have identified 508 potential target mRNAs ... [more]
PLoS ONE Nov. 13, 2018; 13(11);e0206823 [Pubmed: 30418981]
Throughput
- High Throughput
Curated By
- BioGRID