BAIT
PARK2
PRKN
Parkinson disease (autosomal recessive, juvenile) 2, parkin
GO Process (48)
GO Function (21)
GO Component (21)
Gene Ontology Biological Process
- adult locomotory behavior [IMP]
- aggresome assembly [ISO]
- cellular protein catabolic process [ISO]
- cellular response to toxic substance [ISO]
- dopamine metabolic process [IMP]
- dopamine uptake involved in synaptic transmission [IMP]
- learning [IMP]
- locomotory behavior [IMP]
- mitochondrion degradation [ISO]
- negative regulation of actin filament bundle assembly [ISO]
- negative regulation of cell death [ISO]
- negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway [ISO]
- negative regulation of glucokinase activity [ISO]
- negative regulation of insulin secretion [ISO]
- negative regulation of neuron apoptotic process [ISO]
- negative regulation of neuron death [ISO]
- negative regulation of oxidative stress-induced neuron death [ISO]
- negative regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway [ISO]
- negative regulation of protein phosphorylation [ISO]
- negative regulation of reactive oxygen species metabolic process [ISO]
- negative regulation of release of cytochrome c from mitochondria [ISO]
- norepinephrine metabolic process [IMP]
- positive regulation of DNA binding [ISO]
- positive regulation of I-kappaB kinase/NF-kappaB signaling [ISO]
- positive regulation of mitochondrial fusion [ISO]
- positive regulation of proteasomal protein catabolic process [ISO]
- positive regulation of protein linear polyubiquitination [ISO]
- positive regulation of transcription from RNA polymerase II promoter [ISO]
- positive regulation of tumor necrosis factor-mediated signaling pathway [ISO]
- proteasome-mediated ubiquitin-dependent protein catabolic process [ISO]
- protein K48-linked ubiquitination [ISO]
- protein K63-linked ubiquitination [ISO]
- protein autoubiquitination [ISO]
- protein metabolic process [IMP]
- protein monoubiquitination [ISO]
- protein polyubiquitination [ISO]
- protein ubiquitination [IDA, ISO]
- protein ubiquitination involved in ubiquitin-dependent protein catabolic process [ISO]
- regulation of autophagy [ISO]
- regulation of mitochondrion organization [ISO]
- regulation of neurotransmitter secretion [IMP]
- regulation of reactive oxygen species metabolic process [ISO]
- regulation of synaptic transmission [IMP]
- response to endoplasmic reticulum stress [ISO]
- response to unfolded protein [ISO]
- startle response [IMP]
- synaptic transmission, dopaminergic [IMP]
- synaptic transmission, glutamatergic [IMP]
Gene Ontology Molecular Function- F-box domain binding [ISO]
- G-protein coupled receptor binding [ISO]
- Hsp70 protein binding [ISO]
- PDZ domain binding [ISO]
- actin binding [ISO]
- chaperone binding [ISO]
- cullin family protein binding [ISO]
- heat shock protein binding [ISO]
- histone deacetylase binding [ISO]
- identical protein binding [ISO]
- kinase binding [ISO]
- protein binding [IPI]
- protein complex binding [ISO]
- protein kinase binding [ISO]
- tubulin binding [ISO]
- ubiquitin binding [ISO]
- ubiquitin conjugating enzyme binding [ISO]
- ubiquitin protein ligase activity [IDA, ISO]
- ubiquitin protein ligase binding [ISO]
- ubiquitin-protein transferase activity [ISO]
- ubiquitin-specific protease binding [ISO]
- F-box domain binding [ISO]
- G-protein coupled receptor binding [ISO]
- Hsp70 protein binding [ISO]
- PDZ domain binding [ISO]
- actin binding [ISO]
- chaperone binding [ISO]
- cullin family protein binding [ISO]
- heat shock protein binding [ISO]
- histone deacetylase binding [ISO]
- identical protein binding [ISO]
- kinase binding [ISO]
- protein binding [IPI]
- protein complex binding [ISO]
- protein kinase binding [ISO]
- tubulin binding [ISO]
- ubiquitin binding [ISO]
- ubiquitin conjugating enzyme binding [ISO]
- ubiquitin protein ligase activity [IDA, ISO]
- ubiquitin protein ligase binding [ISO]
- ubiquitin-protein transferase activity [ISO]
- ubiquitin-specific protease binding [ISO]
Gene Ontology Cellular Component
- Golgi apparatus [ISO]
- Golgi membrane [ISO]
- LUBAC complex [ISO]
- Parkin-FBXW7-Cul1 ubiquitin ligase complex [ISO]
- aggresome [ISO]
- cytoplasm [IDA, ISO]
- cytoplasmic vesicle [ISO]
- cytosol [ISO]
- endoplasmic reticulum [ISO]
- endoplasmic reticulum membrane [ISO]
- intracellular [ISO]
- membrane raft [ISO]
- mitochondrion [ISO]
- neuron projection [IDA]
- nucleus [IDA]
- perinuclear region of cytoplasm [ISO]
- postsynaptic density [ISO]
- protein complex [IDA]
- synapse [ISO]
- synaptic vesicle [ISO]
- ubiquitin ligase complex [ISO]
Mus musculus
PREY
ABL1
AI325092, Abl, E430008G22Rik, c-Abl, RP23-65P13.3
c-abl oncogene 1, non-receptor tyrosine kinase
GO Process (57)
GO Function (18)
GO Component (16)
Gene Ontology Biological Process
- B cell proliferation [IMP]
- B cell proliferation involved in immune response [IGI, IMP]
- B cell receptor signaling pathway [IMP]
- B-1 B cell homeostasis [IMP]
- Bergmann glial cell differentiation [IGI]
- DNA damage induced protein phosphorylation [ISO]
- actin cytoskeleton organization [IDA]
- actin filament branching [IMP]
- activated T cell proliferation [IMP]
- alpha-beta T cell differentiation [IGI]
- cell migration [IBA]
- cellular response to DNA damage stimulus [ISO]
- cellular response to lipopolysaccharide [IMP]
- cerebellum morphogenesis [IGI]
- collateral sprouting [IMP]
- epidermal growth factor receptor signaling pathway [IGI]
- innate immune response [IBA]
- microspike assembly [IDA]
- negative regulation of BMP signaling pathway [IMP]
- negative regulation of ERK1 and ERK2 cascade [IMP]
- negative regulation of I-kappaB kinase/NF-kappaB signaling [IMP]
- negative regulation of cell-cell adhesion [IGI]
- negative regulation of cellular senescence [IGI]
- negative regulation of endothelial cell apoptotic process [IGI]
- negative regulation of mitotic cell cycle [IDA, IGI]
- negative regulation of phospholipase C activity [ISO]
- negative regulation of protein serine/threonine kinase activity [ISO]
- negative regulation of ubiquitin-protein transferase activity [ISO]
- neuromuscular process controlling balance [IGI]
- peptidyl-tyrosine autophosphorylation [IBA]
- peptidyl-tyrosine phosphorylation [IDA, IGI, ISO]
- phagocytosis [IGI, IMP]
- platelet-derived growth factor receptor signaling pathway [IDA, IMP]
- positive regulation of ERK1 and ERK2 cascade [IMP]
- positive regulation of I-kappaB kinase/NF-kappaB signaling [IGI]
- positive regulation of Wnt signaling pathway, planar cell polarity pathway [IGI]
- positive regulation of apoptotic process [IMP, ISO]
- positive regulation of cytosolic calcium ion concentration [ISO]
- positive regulation of interferon-gamma secretion [IGI]
- positive regulation of interleukin-2 secretion [IGI]
- positive regulation of mitotic cell cycle [IGI]
- positive regulation of neuron death [IMP]
- positive regulation of osteoblast proliferation [IMP]
- positive regulation of oxidoreductase activity [ISO]
- positive regulation of peptidyl-tyrosine phosphorylation [ISO]
- positive regulation of release of sequestered calcium ion into cytosol [IGI]
- regulation of actin cytoskeleton organization [IGI]
- regulation of cell cycle [IDA]
- regulation of cellular senescence [IGI]
- regulation of extracellular matrix organization [IGI]
- regulation of response to DNA damage stimulus [ISO]
- response to oxidative stress [IMP, ISO]
- signal transduction in response to DNA damage [IBA, ISO]
- spleen development [IMP]
- substrate adhesion-dependent cell spreading [IDA]
- thymus development [IMP]
- transitional one stage B cell differentiation [IMP]
Gene Ontology Molecular Function- ATP binding [IDA, ISO]
- SH3 domain binding [ISO]
- actin filament binding [IDA]
- delta-catenin binding [ISO]
- kinase activity [IDA]
- magnesium ion binding [IDA, ISO]
- manganese ion binding [IDA, ISO]
- mitogen-activated protein kinase binding [ISO]
- non-membrane spanning protein tyrosine kinase activity [IBA, ISO]
- proline-rich region binding [ISO]
- protein C-terminus binding [ISO]
- protein binding [IPI]
- protein domain specific binding [IPI]
- protein kinase activity [IDA, ISO]
- protein kinase binding [ISO]
- protein tyrosine kinase activity [IDA, IGI, IMP, ISO]
- receptor binding [IBA]
- syntaxin binding [ISO]
- ATP binding [IDA, ISO]
- SH3 domain binding [ISO]
- actin filament binding [IDA]
- delta-catenin binding [ISO]
- kinase activity [IDA]
- magnesium ion binding [IDA, ISO]
- manganese ion binding [IDA, ISO]
- mitogen-activated protein kinase binding [ISO]
- non-membrane spanning protein tyrosine kinase activity [IBA, ISO]
- proline-rich region binding [ISO]
- protein C-terminus binding [ISO]
- protein binding [IPI]
- protein domain specific binding [IPI]
- protein kinase activity [IDA, ISO]
- protein kinase binding [ISO]
- protein tyrosine kinase activity [IDA, IGI, IMP, ISO]
- receptor binding [IBA]
- syntaxin binding [ISO]
Gene Ontology Cellular Component
- actin cytoskeleton [IDA]
- cell leading edge [IDA]
- cytoplasm [IDA, ISO]
- cytosol [ISA, ISO]
- endoplasmic reticulum [ISO]
- extrinsic component of cytoplasmic side of plasma membrane [IBA]
- growth cone [ISO]
- mitochondrion [ISO]
- neuron projection [ISO]
- neuronal cell body [ISO]
- nucleolus [ISO]
- nucleoplasm [ISO]
- nucleus [IDA, ISO]
- perinuclear region of cytoplasm [ISO]
- ruffle [ISO]
- synapse [ISO]
Mus musculus
Affinity Capture-Western
An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner identified by Western blot with a specific polyclonal antibody or second epitope tag. This category is also used if an interacting protein is visualized directly by dye stain or radioactivity. Note that this differs from any co-purification experiment involving affinity capture in that the co-purification experiment involves at least one extra purification step to get rid of potential contaminating proteins.
Publication
Phosphorylation by the c-Abl protein tyrosine kinase inhibits parkin's ubiquitination and protective function.
Mutations in PARK2/Parkin, which encodes a ubiquitin E3 ligase, cause autosomal recessive Parkinson disease (PD). Here we show that the nonreceptor tyrosine kinase c-Abl phosphorylates tyrosine 143 of parkin, inhibiting parkin's ubiquitin E3 ligase activity and protective function. c-Abl is activated by dopaminergic stress and by dopaminergic neurotoxins, 1-methyl-4-phenylpyridinium (MPP(+)) in vitro and in vivo by 1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine (MPTP), leading to ... [more]
Proc. Natl. Acad. Sci. U.S.A. Sep. 21, 2010; 107(38);16691-6 [Pubmed: 20823226]
Throughput
- Low Throughput
Curated By
- BioGRID