HDAC4
Gene Ontology Biological Process
- chromatin remodeling [ISO]
- histone H3 deacetylation [ISO]
- histone H4 deacetylation [ISO]
- histone deacetylation [ISO]
- negative regulation of cell proliferation [IDA, IMP]
- negative regulation of glycolytic process [IMP]
- negative regulation of myotube differentiation [ISO]
- negative regulation of osteoblast differentiation [IMP]
- negative regulation of sequence-specific DNA binding transcription factor activity [ISO]
- negative regulation of transcription from RNA polymerase II promoter [IDA, IGI, ISO]
- negative regulation of transcription, DNA-templated [IDA, IMP, ISO]
- osteoblast development [IMP]
- peptidyl-lysine deacetylation [ISO]
- positive regulation of cell proliferation [ISO]
- positive regulation of lamellipodium assembly [ISO]
- positive regulation of neuron apoptotic process [ISO]
- positive regulation of protein sumoylation [ISO]
- positive regulation of reactive oxygen species biosynthetic process [ISO]
- positive regulation of sequence-specific DNA binding transcription factor activity [ISO]
- positive regulation of smooth muscle cell migration [ISO]
- positive regulation of smooth muscle cell proliferation [ISO]
- positive regulation of transcription from RNA polymerase II promoter [IMP, ISO]
- positive regulation of transcription, DNA-templated [IMP]
- protein deacetylation [IDA]
- regulation of cardiac muscle contraction by calcium ion signaling [IMP]
- regulation of gene expression, epigenetic [ISO]
- regulation of protein binding [ISO]
- regulation of skeletal muscle fiber development [IGI]
- regulation of striated muscle cell differentiation [IGI]
- response to denervation involved in regulation of muscle adaptation [IMP]
- response to drug [ISO]
- response to interleukin-1 [ISO]
- skeletal system development [IMP]
Gene Ontology Molecular Function- DNA binding [IDA]
- activating transcription factor binding [ISO]
- core promoter binding [ISO]
- histone deacetylase activity [ISO]
- histone deacetylase binding [ISO]
- potassium ion binding [ISO]
- protein binding [IPI]
- protein deacetylase activity [IDA, ISO]
- protein kinase binding [IPI]
- repressing transcription factor binding [ISO]
- sequence-specific DNA binding [ISO]
- transcription corepressor activity [IGI]
- transcription factor binding [IPI, ISO]
- transcription regulatory region DNA binding [ISO]
- zinc ion binding [ISO]
- DNA binding [IDA]
- activating transcription factor binding [ISO]
- core promoter binding [ISO]
- histone deacetylase activity [ISO]
- histone deacetylase binding [ISO]
- potassium ion binding [ISO]
- protein binding [IPI]
- protein deacetylase activity [IDA, ISO]
- protein kinase binding [IPI]
- repressing transcription factor binding [ISO]
- sequence-specific DNA binding [ISO]
- transcription corepressor activity [IGI]
- transcription factor binding [IPI, ISO]
- transcription regulatory region DNA binding [ISO]
- zinc ion binding [ISO]
Gene Ontology Cellular Component
PPP2CA
Gene Ontology Biological Process
- cellular response to glucose stimulus [ISO]
- mesoderm development [IMP]
- negative regulation of calcium ion transmembrane transporter activity [ISO]
- negative regulation of epithelial to mesenchymal transition [ISO]
- negative regulation of protein phosphorylation [ISO]
- negative regulation of transcription factor import into nucleus [ISO]
- negative regulation of transcription from RNA polymerase II promoter [ISO]
- positive regulation of apoptotic process [ISO]
- positive regulation of cysteine-type endopeptidase activity involved in apoptotic process [ISO]
- positive regulation of protein dephosphorylation [ISO]
- positive regulation of protein phosphatase type 2A activity [ISO]
- positive regulation of protein serine/threonine kinase activity [ISO]
- protein dephosphorylation [ISO, TAS]
- protein heterotrimerization [ISO]
- regulation of cell cycle [TAS]
- regulation of protein autophosphorylation [ISO]
- regulation of protein catabolic process [ISO]
- regulation of protein phosphorylation [ISO]
- regulation of receptor activity [ISO]
Gene Ontology Molecular Function- GABA receptor binding [IDA]
- enzyme binding [ISO]
- ion channel binding [ISO]
- protein C-terminus binding [IPI, ISO]
- protein antigen binding [ISO]
- protein binding [IPI]
- protein complex binding [ISO]
- protein dimerization activity [ISO]
- protein domain specific binding [ISO]
- protein kinase B binding [ISO]
- protein kinase binding [ISO]
- protein phosphatase 2A binding [ISO]
- protein phosphatase binding [ISO]
- protein serine/threonine phosphatase activity [ISO, TAS]
- tau protein binding [ISO]
- GABA receptor binding [IDA]
- enzyme binding [ISO]
- ion channel binding [ISO]
- protein C-terminus binding [IPI, ISO]
- protein antigen binding [ISO]
- protein binding [IPI]
- protein complex binding [ISO]
- protein dimerization activity [ISO]
- protein domain specific binding [ISO]
- protein kinase B binding [ISO]
- protein kinase binding [ISO]
- protein phosphatase 2A binding [ISO]
- protein phosphatase binding [ISO]
- protein serine/threonine phosphatase activity [ISO, TAS]
- tau protein binding [ISO]
Gene Ontology Cellular Component
Affinity Capture-Western
An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner identified by Western blot with a specific polyclonal antibody or second epitope tag. This category is also used if an interacting protein is visualized directly by dye stain or radioactivity. Note that this differs from any co-purification experiment involving affinity capture in that the co-purification experiment involves at least one extra purification step to get rid of potential contaminating proteins.
Publication
Nuclear accumulation of HDAC4 in ATM deficiency promotes neurodegeneration in ataxia telangiectasia.
Ataxia telangiectasia is a neurodegenerative disease caused by mutation of the Atm gene. Here we report that ataxia telangiectasia mutated (ATM) deficiency causes nuclear accumulation of histone deacetylase 4 (HDAC4) in neurons and promotes neurodegeneration. Nuclear HDAC4 binds to chromatin, as well as to myocyte enhancer factor 2A (MEF2A) and cAMP-responsive element binding protein (CREB), leading to histone deacetylation and ... [more]
Throughput
- Low Throughput
Additional Notes
- figure 5c.
Related interactions
| Interaction | Experimental Evidence Code | Dataset | Throughput | Score | Curated By | Notes |
|---|---|---|---|---|---|---|
| PPP2CA HDAC4 | Affinity Capture-Western Affinity Capture-Western An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner identified by Western blot with a specific polyclonal antibody or second epitope tag. This category is also used if an interacting protein is visualized directly by dye stain or radioactivity. Note that this differs from any co-purification experiment involving affinity capture in that the co-purification experiment involves at least one extra purification step to get rid of potential contaminating proteins. | Low | - | BioGRID | 669099 |
Curated By
- BioGRID