NPHP1
Gene Ontology Biological Process
Gene Ontology Molecular Function
Gene Ontology Cellular Component
BCAR1
Gene Ontology Biological Process
- B cell receptor signaling pathway [IDA]
- G-protein coupled receptor signaling pathway [ISS, NAS]
- T cell receptor signaling pathway [NAS]
- actin filament organization [IDA]
- antigen receptor-mediated signaling pathway [IDA]
- blood coagulation [TAS]
- cell chemotaxis [IMP]
- cell division [NAS]
- cell migration [IDA]
- cell proliferation [TAS]
- cellular response to hepatocyte growth factor stimulus [IMP]
- epidermal growth factor receptor signaling pathway [ISS]
- hepatocyte growth factor receptor signaling pathway [IMP]
- insulin receptor signaling pathway [ISS]
- integrin-mediated signaling pathway [IDA]
- neurotrophin TRK receptor signaling pathway [ISS]
- platelet activation [TAS]
- platelet-derived growth factor receptor signaling pathway [ISS]
- positive regulation of cell migration [IDA]
- positive regulation of endothelial cell migration [IDA]
- regulation of apoptotic process [TAS]
- regulation of cell growth [TAS]
- vascular endothelial growth factor receptor signaling pathway [IMP]
Gene Ontology Molecular Function
Two-hybrid
Bait protein expressed as a DNA binding domain (DBD) fusion and prey expressed as a transcriptional activation domain (TAD) fusion and interaction measured by reporter gene activation.
Publication
Nephrocystin-1 interacts directly with Ack1 and is expressed in human collecting duct.
Nephronophthisis is characterised by renal fibrosis, tubular basement membrane disruption and corticomedullary cyst formation leading to end stage renal failure. Mutations in NPHP1 account for the underlying genetic defect in 25% of patients with nephronophthisis. Loss of urine concentration ability may be an early feature of nephronophthisis. Using yeast-2-library screening with the SH3 domain of nephrocystin-1 as bait, we identify ... [more]
Throughput
- Low Throughput
Additional Notes
- table 2.
Related interactions
| Interaction | Experimental Evidence Code | Dataset | Throughput | Score | Curated By | Notes |
|---|---|---|---|---|---|---|
| NPHP1 BCAR1 | Affinity Capture-Western Affinity Capture-Western An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner identified by Western blot with a specific polyclonal antibody or second epitope tag. This category is also used if an interacting protein is visualized directly by dye stain or radioactivity. Note that this differs from any co-purification experiment involving affinity capture in that the co-purification experiment involves at least one extra purification step to get rid of potential contaminating proteins. | Low | - | BioGRID | - | |
| NPHP1 BCAR1 | Affinity Capture-Western Affinity Capture-Western An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner identified by Western blot with a specific polyclonal antibody or second epitope tag. This category is also used if an interacting protein is visualized directly by dye stain or radioactivity. Note that this differs from any co-purification experiment involving affinity capture in that the co-purification experiment involves at least one extra purification step to get rid of potential contaminating proteins. | Low | - | BioGRID | - | |
| BCAR1 NPHP1 | Affinity Capture-Western Affinity Capture-Western An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner identified by Western blot with a specific polyclonal antibody or second epitope tag. This category is also used if an interacting protein is visualized directly by dye stain or radioactivity. Note that this differs from any co-purification experiment involving affinity capture in that the co-purification experiment involves at least one extra purification step to get rid of potential contaminating proteins. | Low | - | BioGRID | 696875 | |
| BCAR1 NPHP1 | Two-hybrid Two-hybrid Bait protein expressed as a DNA binding domain (DBD) fusion and prey expressed as a transcriptional activation domain (TAD) fusion and interaction measured by reporter gene activation. | Low | - | BioGRID | - | |
| BCAR1 NPHP1 | Two-hybrid Two-hybrid Bait protein expressed as a DNA binding domain (DBD) fusion and prey expressed as a transcriptional activation domain (TAD) fusion and interaction measured by reporter gene activation. | Low | - | BioGRID | 696870 |
Curated By
- BioGRID