BAIT
LRRK2
AURA17, DARDARIN, PARK8, RIPK7, ROCO2
leucine-rich repeat kinase 2
GO Process (61)
GO Function (21)
GO Component (23)
Gene Ontology Biological Process
- GTP catabolic process [IDA]
- MAPK cascade [IDA]
- activation of MAPK activity [IDA]
- activation of MAPKK activity [IDA]
- cellular protein localization [ISS]
- cellular response to dopamine [IMP]
- cellular response to manganese ion [IMP]
- cellular response to oxidative stress [IMP]
- determination of adult lifespan [IMP]
- endocytosis [IGI, IMP]
- exploration behavior [IMP]
- intracellular distribution of mitochondria [IMP]
- intracellular signal transduction [ISS]
- negative regulation of GTPase activity [IDA]
- negative regulation of hydrogen peroxide-induced cell death [IMP]
- negative regulation of late endosome to lysosome transport [TAS]
- negative regulation of peroxidase activity [IDA]
- negative regulation of protein binding [IMP]
- negative regulation of protein phosphorylation [ISS]
- negative regulation of protein processing [IDA]
- negative regulation of protein processing involved in protein targeting to mitochondrion [IC]
- negative regulation of protein targeting to mitochondrion [IDA]
- negative regulation of thioredoxin peroxidase activity by peptidyl-threonine phosphorylation [IDA]
- neuromuscular junction development [IMP]
- neuron death [IMP]
- neuron projection morphogenesis [IMP]
- olfactory bulb development [IMP]
- peptidyl-serine phosphorylation [IDA]
- peptidyl-threonine phosphorylation [IDA, IMP]
- positive regulation of GTPase activity [IDA]
- positive regulation of MAP kinase activity [IC]
- positive regulation of autophagy [IMP, ISS]
- positive regulation of dopamine receptor signaling pathway [IMP]
- positive regulation of programmed cell death [IDA]
- positive regulation of proteasomal ubiquitin-dependent protein catabolic process [ISS]
- positive regulation of protein autoubiquitination [IDA]
- positive regulation of protein binding [IDA]
- positive regulation of protein phosphorylation [IMP]
- positive regulation of protein ubiquitination [IDA]
- protein autophosphorylation [IDA, IMP]
- protein localization to mitochondrion [TAS]
- protein phosphorylation [IMP]
- reactive oxygen species metabolic process [IMP]
- regulation of branching morphogenesis of a nerve [IMP]
- regulation of dendritic spine morphogenesis [IMP, ISS]
- regulation of dopamine receptor signaling pathway [ISS]
- regulation of excitatory postsynaptic membrane potential [ISS]
- regulation of kidney size [ISS]
- regulation of locomotion [IMP]
- regulation of membrane potential [IMP]
- regulation of mitochondrial depolarization [IMP]
- regulation of mitochondrial fission [TAS]
- regulation of neuroblast proliferation [IMP]
- regulation of neuron death [IMP]
- regulation of neuron maturation [IMP]
- regulation of protein kinase A signaling [ISS]
- regulation of synaptic transmission, glutamatergic [ISS]
- regulation of synaptic vesicle exocytosis [IMP]
- regulation of synaptic vesicle transport [ISS, TAS]
- response to oxidative stress [IMP]
- tangential migration from the subventricular zone to the olfactory bulb [IMP]
Gene Ontology Molecular Function- GTP binding [IDA]
- GTP-dependent protein kinase activity [IDA, IMP]
- GTPase activator activity [IDA]
- GTPase activity [IDA]
- MAP kinase kinase activity [IDA]
- Rho GTPase binding [IPI]
- SNARE binding [IPI]
- actin binding [IPI]
- clathrin binding [IPI]
- glycoprotein binding [IPI]
- identical protein binding [IPI]
- ion channel binding [IPI]
- kinase activity [IDA]
- peroxidase inhibitor activity [IDA]
- protein binding [IPI]
- protein homodimerization activity [IPI]
- protein kinase A binding [IPI]
- protein kinase activity [IDA]
- protein serine/threonine kinase activity [IDA]
- syntaxin-1 binding [IPI]
- tubulin binding [IDA]
- GTP binding [IDA]
- GTP-dependent protein kinase activity [IDA, IMP]
- GTPase activator activity [IDA]
- GTPase activity [IDA]
- MAP kinase kinase activity [IDA]
- Rho GTPase binding [IPI]
- SNARE binding [IPI]
- actin binding [IPI]
- clathrin binding [IPI]
- glycoprotein binding [IPI]
- identical protein binding [IPI]
- ion channel binding [IPI]
- kinase activity [IDA]
- peroxidase inhibitor activity [IDA]
- protein binding [IPI]
- protein homodimerization activity [IPI]
- protein kinase A binding [IPI]
- protein kinase activity [IDA]
- protein serine/threonine kinase activity [IDA]
- syntaxin-1 binding [IPI]
- tubulin binding [IDA]
Gene Ontology Cellular Component
- Golgi apparatus [ISS]
- axon [IDA, ISS]
- cytoplasm [IDA]
- cytoplasmic side of mitochondrial outer membrane [IDA]
- cytoplasmic vesicle [ISS]
- cytosol [IDA]
- dendrite [IDA, ISS]
- dendrite cytoplasm [IDA]
- endoplasmic reticulum [ISS]
- endosome [ISS]
- extracellular space [IDA]
- extracellular vesicular exosome [IDA]
- inclusion body [IMP]
- lysosome [ISS]
- mitochondrial inner membrane [ISS]
- mitochondrial matrix [ISS]
- mitochondrial membrane [IDA]
- mitochondrial outer membrane [ISS]
- mitochondrion [IDA]
- neuron projection [IDA]
- neuronal cell body [IDA]
- perikaryon [IDA, ISS]
- terminal bouton [TAS]
Homo sapiens
PREY
ACTB
BRWS1, PS1TP5BP1
actin, beta
GO Process (17)
GO Function (8)
GO Component (15)
Gene Ontology Biological Process
- 'de novo' posttranslational protein folding [TAS]
- ATP-dependent chromatin remodeling [IDA]
- Fc-gamma receptor signaling pathway involved in phagocytosis [TAS]
- adherens junction organization [TAS]
- axon guidance [TAS]
- blood coagulation [TAS]
- cell junction assembly [TAS]
- cell-cell junction organization [TAS]
- cellular component movement [TAS]
- cellular protein metabolic process [TAS]
- chromatin organization [TAS]
- innate immune response [TAS]
- membrane organization [TAS]
- platelet aggregation [IMP]
- protein folding [TAS]
- retina homeostasis [IEP]
- substantia nigra development [IEP]
Gene Ontology Molecular Function- RNA polymerase II core promoter proximal region sequence-specific DNA binding [IDA]
- RNA polymerase II distal enhancer sequence-specific DNA binding [IDA]
- Tat protein binding [IPI]
- kinesin binding [IPI]
- nitric-oxide synthase binding [IPI]
- nucleosomal DNA binding [IDA]
- protein binding [IPI]
- structural constituent of cytoskeleton [TAS]
- RNA polymerase II core promoter proximal region sequence-specific DNA binding [IDA]
- RNA polymerase II distal enhancer sequence-specific DNA binding [IDA]
- Tat protein binding [IPI]
- kinesin binding [IPI]
- nitric-oxide synthase binding [IPI]
- nucleosomal DNA binding [IDA]
- protein binding [IPI]
- structural constituent of cytoskeleton [TAS]
Gene Ontology Cellular Component
- MLL5-L complex [IDA]
- NuA4 histone acetyltransferase complex [IDA]
- blood microparticle [IDA]
- cytoplasm [TAS]
- cytoplasmic ribonucleoprotein granule [IDA]
- cytoskeleton [TAS]
- cytosol [TAS]
- extracellular space [IDA]
- extracellular vesicular exosome [IDA]
- focal adhesion [IDA]
- membrane [IDA]
- nuclear chromatin [IDA]
- nucleoplasm [TAS]
- protein complex [IDA]
- ribonucleoprotein complex [IDA]
Homo sapiens
Affinity Capture-MS
An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner is identified by mass spectrometric methods.
Publication
A QUICK screen for Lrrk2 interaction partners--leucine-rich repeat kinase 2 is involved in actin cytoskeleton dynamics.
Mutations in human leucine-rich repeat kinase 2 (Lrrk2), a protein of yet unknown function, are linked to Parkinson's disease caused by degeneration of midbrain dopaminergic neurons. The protein comprises several domains including a GTPase and a kinase domain both affected by several pathogenic mutations. To elucidate the molecular interaction network of endogenous Lrrk2 under stoichiometric constraints, we applied QUICK (quantitative ... [more]
Mol. Cell Proteomics Jan. 01, 2011; 10(1);M110.001172 [Pubmed: 20876399]
Throughput
- High Throughput
Additional Notes
- table 1.
Related interactions
| Interaction | Experimental Evidence Code | Dataset | Throughput | Score | Curated By | Notes |
|---|---|---|---|---|---|---|
| LRRK2 ACTB | Reconstituted Complex Reconstituted Complex An interaction is inferred between proteins in vitro. This can include proteins in recombinant form or proteins isolated directly from cells with recombinant or purified bait. For example, GST pull-down assays where a GST-tagged protein is first isolated and then used to fish interactors from cell lysates are considered reconstituted complexes (e.g. PUBMED: 14657240, Fig. 4A or PUBMED: 14761940, Fig. 5). This can also include gel-shifts, surface plasmon resonance, isothermal titration calorimetry (ITC) and bio-layer interferometry (BLI) experiments. The bait-hit directionality may not be clear for 2 interacting proteins. In these cases the directionality is up to the discretion of the curator. | Low | - | BioGRID | 723151 |
Curated By
- BioGRID