BAIT
RAB5B
C030027M18Rik
RAB5B, member RAS oncogene family
GO Process (7)
GO Function (5)
GO Component (6)
Gene Ontology Biological Process
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Mus musculus
PREY
LRRK2
4921513O20Rik, 9330188B09Rik, AW561911, D630001M17Rik, Gm927, cI-46
leucine-rich repeat kinase 2
GO Process (48)
GO Function (21)
GO Component (29)
Gene Ontology Biological Process
- GTP catabolic process [ISO]
- MAPK cascade [ISO]
- activation of MAPK activity [ISO]
- activation of MAPKK activity [ISO]
- cellular response to dopamine [ISO]
- cellular response to manganese ion [ISO]
- cellular response to oxidative stress [ISO]
- determination of adult lifespan [ISO]
- endocytosis [ISO]
- exploration behavior [ISO]
- intracellular distribution of mitochondria [ISO]
- negative regulation of GTPase activity [ISO]
- negative regulation of hydrogen peroxide-induced cell death [ISO]
- negative regulation of peroxidase activity [ISO]
- negative regulation of protein binding [ISO]
- negative regulation of protein processing [ISO]
- negative regulation of protein targeting to mitochondrion [ISO]
- negative regulation of thioredoxin peroxidase activity by peptidyl-threonine phosphorylation [ISO]
- neuromuscular junction development [ISO]
- neuron death [ISO]
- neuron projection morphogenesis [ISO]
- olfactory bulb development [ISO]
- peptidyl-serine phosphorylation [ISO]
- peptidyl-threonine phosphorylation [ISO]
- positive regulation of GTPase activity [ISO]
- positive regulation of autophagy [IMP, ISO]
- positive regulation of dopamine receptor signaling pathway [ISO]
- positive regulation of programmed cell death [ISO]
- positive regulation of proteasomal ubiquitin-dependent protein catabolic process [IMP]
- positive regulation of protein autoubiquitination [ISO]
- positive regulation of protein binding [ISO]
- positive regulation of protein phosphorylation [ISO]
- positive regulation of protein ubiquitination [ISO]
- protein autophosphorylation [ISA, ISO]
- protein phosphorylation [ISA, ISO]
- reactive oxygen species metabolic process [ISO]
- regulation of branching morphogenesis of a nerve [ISO]
- regulation of dendritic spine morphogenesis [ISO]
- regulation of kidney size [IMP]
- regulation of locomotion [ISO]
- regulation of membrane potential [ISO]
- regulation of mitochondrial depolarization [ISO]
- regulation of neuroblast proliferation [ISO]
- regulation of neuron death [ISO]
- regulation of neuron maturation [ISO]
- regulation of synaptic vesicle exocytosis [ISO]
- response to oxidative stress [ISO]
- tangential migration from the subventricular zone to the olfactory bulb [ISO]
Gene Ontology Molecular Function- GTP binding [ISA, ISO]
- GTP-dependent protein kinase activity [ISA, ISO]
- GTPase activator activity [ISO]
- GTPase activity [ISO]
- MAP kinase kinase activity [ISO]
- Rho GTPase binding [IPI, ISO]
- SNARE binding [ISO]
- actin binding [ISO]
- clathrin binding [ISO]
- glycoprotein binding [ISO]
- identical protein binding [IPI, ISO]
- ion channel binding [ISO]
- kinase activity [ISO]
- peroxidase inhibitor activity [ISO]
- protein binding [IPI]
- protein homodimerization activity [ISO]
- protein kinase A binding [ISO]
- protein kinase activity [ISO]
- protein serine/threonine kinase activity [ISO]
- syntaxin-1 binding [ISO]
- tubulin binding [ISO]
- GTP binding [ISA, ISO]
- GTP-dependent protein kinase activity [ISA, ISO]
- GTPase activator activity [ISO]
- GTPase activity [ISO]
- MAP kinase kinase activity [ISO]
- Rho GTPase binding [IPI, ISO]
- SNARE binding [ISO]
- actin binding [ISO]
- clathrin binding [ISO]
- glycoprotein binding [ISO]
- identical protein binding [IPI, ISO]
- ion channel binding [ISO]
- kinase activity [ISO]
- peroxidase inhibitor activity [ISO]
- protein binding [IPI]
- protein homodimerization activity [ISO]
- protein kinase A binding [ISO]
- protein kinase activity [ISO]
- protein serine/threonine kinase activity [ISO]
- syntaxin-1 binding [ISO]
- tubulin binding [ISO]
Gene Ontology Cellular Component
- Golgi apparatus [IDA]
- axon [ISO]
- cytoplasm [ISO]
- cytoplasmic side of mitochondrial outer membrane [ISO]
- cytoplasmic vesicle [IDA]
- cytosol [ISO]
- dendrite [ISO]
- dendrite cytoplasm [ISO]
- endoplasmic reticulum [IDA]
- endosome [IDA]
- extracellular space [ISO]
- extracellular vesicular exosome [ISO]
- inclusion body [ISO]
- intracellular membrane-bounded organelle [ISO]
- lysosome [IDA]
- membrane [ISO]
- membrane raft [IDA]
- mitochondrial inner membrane [IDA]
- mitochondrial matrix [IDA]
- mitochondrial membrane [ISO]
- mitochondrial outer membrane [IDA]
- mitochondrion [ISO]
- neuron projection [ISO]
- neuronal cell body [ISO]
- perikaryon [ISO]
- plasma membrane [IDA]
- synapse [IDA]
- synaptic vesicle [IDA]
- trans-Golgi network [IDA]
Mus musculus
Phenotypic Suppression
A genetic interaction is inferred when mutation or over expression of one gene results in suppression of any phenotype (other than lethality/growth defect) associated with mutation or over expression of another gene.
Publication
LRRK2 regulates synaptic vesicle endocytosis.
The leucine-rich repeat kinase 2 (LRRK2) has been identified as the defective gene at the PARK8 locus causing the autosomal dominant form of Parkinson's disease (PD). Although several LRRK2 mutations were found in familial as well as sporadic PD patients, its physiological functions are not clearly defined. In this study, using yeast two-hybrid screening, we report the identification of Rab5b ... [more]
Exp. Cell Res. Jun. 10, 2008; 314(10);2055-65 [Pubmed: 18445495]
Throughput
- Low Throughput
Additional Notes
- figure 3.
Related interactions
| Interaction | Experimental Evidence Code | Dataset | Throughput | Score | Curated By | Notes |
|---|---|---|---|---|---|---|
| RAB5B LRRK2 | Co-fractionation Co-fractionation Interaction inferred from the presence of two or more protein subunits in a partially purified protein preparation. If co-fractionation is demonstrated between 3 or more proteins, then add them as a complex. | Low | - | BioGRID | 723304 |
Curated By
- BioGRID