BAIT
EIF4A3
DDX48, MUK34, NMP265, NUK34, RCPS, eIF4AIII
eukaryotic translation initiation factor 4A3
GO Process (12)
GO Function (6)
GO Component (6)
Gene Ontology Biological Process
- ATP catabolic process [IDA]
- RNA metabolic process [TAS]
- cytokine-mediated signaling pathway [TAS]
- embryonic cranial skeleton morphogenesis [IMP]
- gene expression [TAS]
- mRNA metabolic process [TAS]
- mRNA splicing, via spliceosome [IC]
- negative regulation of translation [IDA]
- nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay [TAS]
- nuclear-transcribed mRNA catabolic process, nonsense-mediated decay [IMP, TAS]
- nuclear-transcribed mRNA poly(A) tail shortening [TAS]
- positive regulation of translation [IMP]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Homo sapiens
PREY
ACTC1
ACTC, ASD5, CMD1R, CMH11, LVNC4
actin, alpha, cardiac muscle 1
GO Process (10)
GO Function (3)
GO Component (11)
Gene Ontology Biological Process
- ATP catabolic process [IDA]
- actin filament-based movement [IDA]
- actin-myosin filament sliding [IMP]
- actomyosin structure organization [ISS]
- apoptotic process [ISS]
- cardiac muscle tissue morphogenesis [ISS]
- cardiac myofibril assembly [ISS]
- heart contraction [IMP]
- muscle filament sliding [TAS]
- skeletal muscle thin filament assembly [ISS]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Homo sapiens
Affinity Capture-MS
An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner is identified by mass spectrometric methods.
Publication
The cellular EJC interactome reveals higher-order mRNP structure and an EJC-SR protein nexus.
In addition to sculpting eukaryotic transcripts by removing introns, pre-mRNA splicing greatly impacts protein composition of the emerging mRNP. The exon junction complex (EJC), deposited upstream of exon-exon junctions after splicing, is a major constituent of spliced mRNPs. Here, we report comprehensive analysis of the endogenous human EJC protein and RNA interactomes. We confirm that the major "canonical" EJC occupancy ... [more]
Cell Nov. 09, 2012; 151(4);750-64 [Pubmed: 23084401]
Throughput
- High Throughput
Curated By
- BioGRID