BAIT
YBX1
BP-8, CSDA2, CSDB, DBPB, MDR-NF1, NSEP-1, NSEP1, YB-1, YB1
Y box binding protein 1
GO Process (7)
GO Function (8)
GO Component (11)
Gene Ontology Biological Process
Gene Ontology Molecular Function- DNA binding [IDA, TAS]
- RNA binding [IDA]
- RNA polymerase II core promoter proximal region sequence-specific DNA binding [IDA]
- RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription [IDA]
- double-stranded DNA binding [TAS]
- poly(A) RNA binding [IDA]
- protein binding [IPI]
- sequence-specific DNA binding transcription factor activity [TAS]
- DNA binding [IDA, TAS]
- RNA binding [IDA]
- RNA polymerase II core promoter proximal region sequence-specific DNA binding [IDA]
- RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription [IDA]
- double-stranded DNA binding [TAS]
- poly(A) RNA binding [IDA]
- protein binding [IPI]
- sequence-specific DNA binding transcription factor activity [TAS]
Gene Ontology Cellular Component
- CRD-mediated mRNA stability complex [IDA]
- U12-type spliceosomal complex [IDA]
- cytoplasm [IDA]
- cytoplasmic stress granule [IDA]
- extracellular vesicular exosome [IDA]
- histone pre-mRNA 3'end processing complex [ISS]
- intracellular membrane-bounded organelle [IDA]
- nuclear membrane [IDA]
- nucleoplasm [TAS]
- nucleus [TAS]
- ribonucleoprotein complex [IDA]
Homo sapiens
PREY
IL7R
CD127, CDW127, IL-7R-alpha, IL7RA, ILRA
interleukin 7 receptor
GO Process (5)
GO Function (3)
GO Component (1)
Gene Ontology Biological Process
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Homo sapiens
Protein-RNA
An interaction is detected between and protein and an RNA in vitro.
Publication
Cleavage and polyadenylation specificity factor 1 (CPSF1) regulates alternative splicing of interleukin 7 receptor (IL7R) exon 6.
Interleukin 7 receptor, IL7R, is expressed exclusively on cells of the lymphoid lineage, and its expression is crucial for the development and maintenance of T cells. Alternative splicing of IL7R exon 6 results in membrane-bound (exon 6 included) and soluble (exon 6 skipped) IL7R isoforms. Interestingly, the inclusion of exon 6 is affected by a single-nucleotide polymorphism associated with the ... [more]
RNA Jan. 01, 2013; 19(1);103-15 [Pubmed: 23151878]
Throughput
- Low Throughput
Additional Notes
- proteins identified by tobramycin RNA affinity chromatography with an IL7R mRNA spanning the first 40 nt of exon 6
Curated By
- BioGRID