BAIT
UBC
ubiquitin C
GO Process (2)
GO Function (2)
GO Component (2)
Gene Ontology Biological Process
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Rattus norvegicus
PREY
RAB6A
RCO4-3, Rab6, Rab6b
RAB6A, member RAS oncogene family
GO Process (13)
GO Function (7)
GO Component (6)
Gene Ontology Biological Process
- GTP catabolic process [ISO, ISS, TAS]
- Golgi vesicle transport [TAS]
- Rab protein signal transduction [IBA, IC]
- antigen processing and presentation [ISO]
- early endosome to Golgi transport [ISO]
- intra-Golgi vesicle-mediated transport [IBA]
- intracellular protein transport [IBA]
- peptidyl-cysteine methylation [ISO]
- positive regulation of ATPase activity [IDA]
- protein localization to Golgi apparatus [ISO]
- protein targeting to Golgi [ISO, ISS]
- retrograde transport, endosome to Golgi [IBA]
- retrograde vesicle-mediated transport, Golgi to ER [IBA]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Rattus norvegicus
Affinity Capture-MS
An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner is identified by mass spectrometric methods.
Publication
Synaptic Protein Ubiquitination in Rat Brain Revealed by Antibody-based Ubiquitome Analysis.
Protein ubiquitination is an essential post-translational modification regulating neurodevelopment, synaptic plasticity, learning, and memory, and its dysregulation contributes to the pathogenesis of neurological diseases. Here we report a systematic analysis of ubiquitinated proteome (ubiquitome) in rat brain using a newly developed monoclonal antibody that recognizes the diglycine tag on lysine residues in trypsinized peptides (K-GG peptides). Initial antibody specificity analysis ... [more]
J. Proteome Res. Aug. 15, 2012; 0(0); [Pubmed: 22871113]
Throughput
- Low Throughput
Curated By
- BioGRID