BAIT
UBC
ubiquitin C
GO Process (2)
GO Function (2)
GO Component (2)
Gene Ontology Biological Process
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Rattus norvegicus
PREY
YOD1
hshin7
YOD1 deubiquitinase
GO Process (8)
GO Function (2)
GO Component (0)
Gene Ontology Biological Process
- ER-associated ubiquitin-dependent protein catabolic process [ISO, ISS]
- endoplasmic reticulum unfolded protein response [ISO, ISS]
- protein K11-linked deubiquitination [ISO, ISS]
- protein K27-linked deubiquitination [ISO, ISS]
- protein K29-linked deubiquitination [ISO, ISS]
- protein K33-linked deubiquitination [ISO, ISS]
- protein K48-linked deubiquitination [ISO, ISS]
- protein K63-linked deubiquitination [ISO, ISS]
Gene Ontology Molecular Function
Rattus norvegicus
Affinity Capture-MS
An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner is identified by mass spectrometric methods.
Publication
Synaptic Protein Ubiquitination in Rat Brain Revealed by Antibody-based Ubiquitome Analysis.
Protein ubiquitination is an essential post-translational modification regulating neurodevelopment, synaptic plasticity, learning, and memory, and its dysregulation contributes to the pathogenesis of neurological diseases. Here we report a systematic analysis of ubiquitinated proteome (ubiquitome) in rat brain using a newly developed monoclonal antibody that recognizes the diglycine tag on lysine residues in trypsinized peptides (K-GG peptides). Initial antibody specificity analysis ... [more]
J. Proteome Res. Aug. 15, 2012; 0(0); [Pubmed: 22871113]
Throughput
- Low Throughput
Curated By
- BioGRID