PREY

UBE2D3

E2(17)KB3, UBC4/5, UBCH5C
ubiquitin-conjugating enzyme E2D 3
Homo sapiens

Reconstituted Complex

An interaction is inferred between proteins in vitro. This can include proteins in recombinant form or proteins isolated directly from cells with recombinant or purified bait. For example, GST pull-down assays where a GST-tagged protein is first isolated and then used to fish interactors from cell lysates are considered reconstituted complexes (e.g. PUBMED: 14657240, Fig. 4A or PUBMED: 14761940, Fig. 5). This can also include gel-shifts, surface plasmon resonance, isothermal titration calorimetry (ITC) and bio-layer interferometry (BLI) experiments. The bait-hit directionality may not be clear for 2 interacting proteins. In these cases the directionality is up to the discretion of the curator.

Publication

F-box and WD repeat domain containing-7 (Fbxw7) Targets Endoplasmic Reticulum-Anchored Osteogenic and Chondrogenic Transcriptional Factors for Degradation.

Yumimoto K, Matsumoto M, Onoyama I, Imaizumi K, Nakayama KI

Although identification of substrates for an enzyme is a key step in elucidation of its biological functions, detection of the interaction between enzymes and substrates remains challenging. We recently developed a new approach, termed DiPIUS (differential proteomics-based identification of ubiquitylation substrates), for the discovery of substrates of ubiquitin ligases. We have now applied DiPIUS to Fbxw7, the F-box protein component ... [more]

J. Biol. Chem. Aug. 16, 2013; 0(0); [Pubmed: 23955342]

Throughput

  • Low Throughput

Additional Notes

  • Human UbcH5C (E2)
  • SCFFbxw7
  • rabbit Uba1 (E1)

Related interactions

InteractionExperimental Evidence CodeDatasetThroughputScoreCurated ByNotes
RBX1 UBE2D3
Reconstituted Complex
Reconstituted Complex

An interaction is inferred between proteins in vitro. This can include proteins in recombinant form or proteins isolated directly from cells with recombinant or purified bait. For example, GST pull-down assays where a GST-tagged protein is first isolated and then used to fish interactors from cell lysates are considered reconstituted complexes (e.g. PUBMED: 14657240, Fig. 4A or PUBMED: 14761940, Fig. 5). This can also include gel-shifts, surface plasmon resonance, isothermal titration calorimetry (ITC) and bio-layer interferometry (BLI) experiments. The bait-hit directionality may not be clear for 2 interacting proteins. In these cases the directionality is up to the discretion of the curator.

Low-BioGRID
2521629

Curated By

  • BioGRID