HNF1A
Gene Ontology Biological Process
- glucose homeostasis [IMP]
- glucose import [IMP]
- insulin secretion [IMP]
- positive regulation of transcription from RNA polymerase II promoter [ISS]
- positive regulation of transcription initiation from RNA polymerase II promoter [IGI]
- positive regulation of transcription, DNA-templated [IDA]
- regulation of pronephros size [IMP]
- regulation of transcription from RNA polymerase II promoter [IDA]
- renal glucose absorption [IMP]
Gene Ontology Molecular Function- DNA binding [IDA]
- RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription [ISS]
- protein binding [IPI]
- protein dimerization activity [IPI]
- protein heterodimerization activity [IDA]
- protein homodimerization activity [IPI]
- sequence-specific DNA binding transcription factor activity [IDA]
- transcription regulatory region DNA binding [IDA]
- DNA binding [IDA]
- RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription [ISS]
- protein binding [IPI]
- protein dimerization activity [IPI]
- protein heterodimerization activity [IDA]
- protein homodimerization activity [IPI]
- sequence-specific DNA binding transcription factor activity [IDA]
- transcription regulatory region DNA binding [IDA]
Gene Ontology Cellular Component
RYR3
Gene Ontology Biological Process
- calcium ion transmembrane transport [ISS]
- calcium ion transport [IMP]
- cellular response to ATP [ISS]
- cellular response to caffeine [ISS]
- cellular response to calcium ion [ISS]
- cellular response to magnesium ion [ISS]
- ion transmembrane transport [TAS]
- protein homotetramerization [ISS]
- transmembrane transport [TAS]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Reconstituted Complex
An interaction is inferred between proteins in vitro. This can include proteins in recombinant form or proteins isolated directly from cells with recombinant or purified bait. For example, GST pull-down assays where a GST-tagged protein is first isolated and then used to fish interactors from cell lysates are considered reconstituted complexes (e.g. PUBMED: 14657240, Fig. 4A or PUBMED: 14761940, Fig. 5). This can also include gel-shifts, surface plasmon resonance, isothermal titration calorimetry (ITC) and bio-layer interferometry (BLI) experiments. The bait-hit directionality may not be clear for 2 interacting proteins. In these cases the directionality is up to the discretion of the curator.
Publication
A comprehensive resource of interacting protein regions for refining human transcription factor networks.
Large-scale data sets of protein-protein interactions (PPIs) are a valuable resource for mapping and analysis of the topological and dynamic features of interactome networks. The currently available large-scale PPI data sets only contain information on interaction partners. The data presented in this study also include the sequences involved in the interactions (i.e., the interacting regions, IRs) suggested to correspond to ... [more]
Throughput
- High Throughput
Additional Notes
- Protein-protein interactions detected between proteins translated in vitro
Curated By
- BioGRID