BAIT
BRCA1
RP23-328K2.8
breast cancer 1
GO Process (43)
GO Function (6)
GO Component (13)
Gene Ontology Biological Process
- DNA replication [IMP]
- G2 DNA damage checkpoint [ISO]
- cellular response to DNA damage stimulus [IMP]
- cellular response to indole-3-methanol [ISO]
- cellular response to tumor necrosis factor [ISO]
- centrosome cycle [IGI]
- centrosome duplication [TAS]
- chordate embryonic development [IMP]
- chromosome segregation [ISO]
- dosage compensation by inactivation of X chromosome [IDA]
- double-strand break repair [ISO]
- double-strand break repair via homologous recombination [IBA, ISO]
- intrinsic apoptotic signaling pathway in response to DNA damage [ISO]
- negative regulation of extrinsic apoptotic signaling pathway via death domain receptors [ISO]
- negative regulation of fatty acid biosynthetic process [IBA, ISO]
- negative regulation of histone H3-K4 methylation [IMP]
- negative regulation of histone H3-K9 methylation [IMP, ISO]
- negative regulation of histone acetylation [IMP]
- negative regulation of reactive oxygen species metabolic process [ISO]
- negative regulation of transcription, DNA-templated [ISO]
- positive regulation of DNA repair [ISO]
- positive regulation of angiogenesis [ISO]
- positive regulation of cell cycle arrest [IBA, ISO]
- positive regulation of gene expression [ISO]
- positive regulation of histone H3-K4 methylation [IMP, ISO]
- positive regulation of histone H3-K9 acetylation [IMP, ISO]
- positive regulation of histone H3-K9 methylation [IMP]
- positive regulation of histone H4-K16 acetylation [IMP, ISO]
- positive regulation of histone H4-K20 methylation [IMP, ISO]
- positive regulation of histone acetylation [IMP, ISO]
- positive regulation of protein ubiquitination [ISO]
- positive regulation of transcription from RNA polymerase II promoter [IMP, ISO]
- positive regulation vascular endothelial growth factor production [ISO]
- postreplication repair [ISO]
- protein K6-linked ubiquitination [ISO]
- protein autoubiquitination [ISO]
- protein ubiquitination [IBA, ISO]
- regulation of DNA methylation [IMP]
- regulation of cell motility [IBA]
- regulation of cell proliferation [IBA]
- regulation of gene expression by genetic imprinting [IMP]
- response to estrogen [ISO]
- response to ionizing radiation [ISO]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Mus musculus
PREY
UBC
HMG20
ubiquitin C
GO Process (75)
GO Function (3)
GO Component (6)
Gene Ontology Biological Process
- DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest [TAS]
- DNA repair [TAS]
- Fc-epsilon receptor signaling pathway [TAS]
- G1/S transition of mitotic cell cycle [TAS]
- G2/M transition of mitotic cell cycle [TAS]
- I-kappaB kinase/NF-kappaB signaling [TAS]
- JNK cascade [TAS]
- MyD88-dependent toll-like receptor signaling pathway [TAS]
- MyD88-independent toll-like receptor signaling pathway [TAS]
- Notch receptor processing [TAS]
- Notch signaling pathway [TAS]
- RNA metabolic process [TAS]
- T cell receptor signaling pathway [TAS]
- TRIF-dependent toll-like receptor signaling pathway [TAS]
- activation of MAPK activity [TAS]
- anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process [TAS]
- antigen processing and presentation of exogenous peptide antigen via MHC class I [TAS]
- antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent [TAS]
- antigen processing and presentation of peptide antigen via MHC class I [TAS]
- apoptotic process [TAS]
- apoptotic signaling pathway [TAS]
- carbohydrate metabolic process [TAS]
- cellular response to hypoxia [TAS]
- cytokine-mediated signaling pathway [TAS]
- endosomal transport [TAS]
- epidermal growth factor receptor signaling pathway [TAS]
- fibroblast growth factor receptor signaling pathway [TAS]
- gene expression [TAS]
- glucose metabolic process [TAS]
- glycogen biosynthetic process [TAS]
- innate immune response [TAS]
- intracellular transport of virus [TAS]
- ion transmembrane transport [TAS]
- mRNA metabolic process [TAS]
- membrane organization [TAS]
- mitotic cell cycle [TAS]
- negative regulation of apoptotic process [TAS]
- negative regulation of epidermal growth factor receptor signaling pathway [TAS]
- negative regulation of transcription from RNA polymerase II promoter [TAS]
- negative regulation of transforming growth factor beta receptor signaling pathway [TAS]
- negative regulation of type I interferon production [TAS]
- negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle [TAS]
- neurotrophin TRK receptor signaling pathway [TAS]
- nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway [TAS]
- nucleotide-binding oligomerization domain containing signaling pathway [TAS]
- positive regulation of I-kappaB kinase/NF-kappaB signaling [TAS]
- positive regulation of NF-kappaB transcription factor activity [TAS]
- positive regulation of apoptotic process [TAS]
- positive regulation of transcription from RNA polymerase II promoter [TAS]
- positive regulation of type I interferon production [TAS]
- positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle [TAS]
- protein polyubiquitination [TAS]
- regulation of apoptotic process [TAS]
- regulation of transcription from RNA polymerase II promoter in response to hypoxia [TAS]
- regulation of type I interferon production [TAS]
- regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle [TAS]
- small molecule metabolic process [TAS]
- stress-activated MAPK cascade [TAS]
- toll-like receptor 10 signaling pathway [TAS]
- toll-like receptor 2 signaling pathway [TAS]
- toll-like receptor 3 signaling pathway [TAS]
- toll-like receptor 4 signaling pathway [TAS]
- toll-like receptor 5 signaling pathway [TAS]
- toll-like receptor 9 signaling pathway [TAS]
- toll-like receptor TLR1:TLR2 signaling pathway [TAS]
- toll-like receptor TLR6:TLR2 signaling pathway [TAS]
- toll-like receptor signaling pathway [TAS]
- transcription initiation from RNA polymerase II promoter [TAS]
- transcription, DNA-templated [TAS]
- transforming growth factor beta receptor signaling pathway [TAS]
- transmembrane transport [TAS]
- viral life cycle [TAS]
- viral process [TAS]
- viral protein processing [TAS]
- virion assembly [TAS]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Homo sapiens
Affinity Capture-Western
An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner identified by Western blot with a specific polyclonal antibody or second epitope tag. This category is also used if an interacting protein is visualized directly by dye stain or radioactivity. Note that this differs from any co-purification experiment involving affinity capture in that the co-purification experiment involves at least one extra purification step to get rid of potential contaminating proteins.
Publication
RING fingers mediate ubiquitin-conjugating enzyme (E2)-dependent ubiquitination.
A RING finger-containing protein (AO7) that binds ubiquitin-conjugating enzymes (E2s) and is a substrate for E2-dependent ubiquitination was identified. Mutations of cation-coordinating residues within AO7's RING finger abolished ubiquitination, as did chelation of zinc. Several otherwise-unrelated RING finger proteins, including BRCA1, Siah-1, TRC8, NF-X1, kf-1, and Praja1, were assessed for their ability to facilitate E2-dependent ubiquitination. In all cases, ubiquitination ... [more]
Proc. Natl. Acad. Sci. U.S.A. Sep. 28, 1999; 96(20);11364-9 [Pubmed: 10500182]
Throughput
- Low Throughput
Additional Notes
- likely ubiquitin conjugate; E2: Ube2d2
Curated By
- BioGRID