BIRC2
Gene Ontology Biological Process
- MyD88-independent toll-like receptor signaling pathway [TAS]
- NIK/NF-kappaB signaling [TAS]
- TRIF-dependent toll-like receptor signaling pathway [TAS]
- apoptotic process [TAS]
- cell surface receptor signaling pathway [TAS]
- cellular component disassembly involved in execution phase of apoptosis [TAS]
- inhibition of cysteine-type endopeptidase activity involved in apoptotic process [IBA]
- innate immune response [TAS]
- negative regulation of apoptotic process [IDA, TAS]
- negative regulation of necroptotic process [IBA]
- positive regulation of I-kappaB kinase/NF-kappaB signaling [IEP]
- positive regulation of protein K48-linked ubiquitination [IDA]
- positive regulation of protein K63-linked ubiquitination [IDA]
- positive regulation of protein monoubiquitination [IDA]
- proteasome-mediated ubiquitin-dependent protein catabolic process [IDA]
- protein polyubiquitination [IDA]
- regulation of RIG-I signaling pathway [TAS]
- regulation of apoptotic process [IMP]
- regulation of cell cycle [IDA]
- regulation of cell differentiation [TAS]
- regulation of cell proliferation [TAS]
- regulation of cysteine-type endopeptidase activity [TAS]
- regulation of inflammatory response [TAS]
- regulation of innate immune response [TAS]
- regulation of necroptotic process [IMP]
- regulation of nucleotide-binding oligomerization domain containing signaling pathway [TAS]
- regulation of toll-like receptor signaling pathway [TAS]
- spindle assembly involved in mitosis [IBA]
- toll-like receptor 3 signaling pathway [TAS]
- toll-like receptor 4 signaling pathway [TAS]
- toll-like receptor signaling pathway [TAS]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
PCSK9
Gene Ontology Biological Process
- cellular response to insulin stimulus [ISS]
- cellular response to starvation [ISS]
- cholesterol homeostasis [IMP]
- kidney development [ISS]
- liver development [ISS]
- low-density lipoprotein particle receptor catabolic process [IDA]
- lysosomal transport [IDA]
- negative regulation of low-density lipoprotein particle clearance [IDA]
- negative regulation of receptor recycling [IDA]
- neurogenesis [ISS]
- neuron differentiation [ISS]
- positive regulation of neuron apoptotic process [IMP]
- positive regulation of receptor internalization [IDA]
- protein autoprocessing [IDA]
- proteolysis [IBA]
- regulation of neuron apoptotic process [ISS]
- regulation of receptor activity [IDA]
Gene Ontology Molecular Function- apolipoprotein binding [ISS]
- apolipoprotein receptor binding [IDA]
- low-density lipoprotein particle binding [ISS]
- low-density lipoprotein particle receptor binding [IDA, IPI]
- poly(A) RNA binding [IDA]
- protein binding [IPI]
- protein self-association [IDA]
- serine-type endopeptidase activity [IDA]
- sodium channel inhibitor activity [IDA]
- very-low-density lipoprotein particle binding [ISS]
- very-low-density lipoprotein particle receptor binding [IDA]
- apolipoprotein binding [ISS]
- apolipoprotein receptor binding [IDA]
- low-density lipoprotein particle binding [ISS]
- low-density lipoprotein particle receptor binding [IDA, IPI]
- poly(A) RNA binding [IDA]
- protein binding [IPI]
- protein self-association [IDA]
- serine-type endopeptidase activity [IDA]
- sodium channel inhibitor activity [IDA]
- very-low-density lipoprotein particle binding [ISS]
- very-low-density lipoprotein particle receptor binding [IDA]
Gene Ontology Cellular Component
Affinity Capture-Western
An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner identified by Western blot with a specific polyclonal antibody or second epitope tag. This category is also used if an interacting protein is visualized directly by dye stain or radioactivity. Note that this differs from any co-purification experiment involving affinity capture in that the co-purification experiment involves at least one extra purification step to get rid of potential contaminating proteins.
Publication
c-IAP1 Binds and Processes PCSK9 Protein: Linking the c-IAP1 in a TNF-α Pathway to PCSK9-Mediated LDLR Degradation Pathway.
Recent genetic studies have shown that PCSK9, one of the key genes in cholesterol metabolism, plays a critical role by controlling the level of low-density lipoprotein receptor. However, how PCSK9 mediates LDLR degradation is still unknown. By combining a shotgun proteomic method and differential analysis of natural occurring mutations of the PCSK9 gene, we found that an E3 ubiquitin ligase ... [more]
Throughput
- Low Throughput
Additional Notes
- Figure 2
Related interactions
| Interaction | Experimental Evidence Code | Dataset | Throughput | Score | Curated By | Notes |
|---|---|---|---|---|---|---|
| PCSK9 BIRC2 | Affinity Capture-MS Affinity Capture-MS An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner is identified by mass spectrometric methods. | Low | - | BioGRID | 1034669 | |
| PCSK9 BIRC2 | Affinity Capture-Western Affinity Capture-Western An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner identified by Western blot with a specific polyclonal antibody or second epitope tag. This category is also used if an interacting protein is visualized directly by dye stain or radioactivity. Note that this differs from any co-purification experiment involving affinity capture in that the co-purification experiment involves at least one extra purification step to get rid of potential contaminating proteins. | Low | - | BioGRID | 1034685 | |
| BIRC2 PCSK9 | Biochemical Activity Biochemical Activity An interaction is inferred from the biochemical effect of one protein upon another, for example, GTP-GDP exchange activity or phosphorylation of a substrate by a kinase. The bait protein executes the activity on the substrate hit protein. A Modification value is recorded for interactions of this type with the possible values Phosphorylation, Ubiquitination, Sumoylation, Dephosphorylation, Methylation, Prenylation, Acetylation, Deubiquitination, Proteolytic Processing, Glucosylation, Nedd(Rub1)ylation, Deacetylation, No Modification, Demethylation. | Low | - | BioGRID | 1034694 | |
| BIRC2 PCSK9 | Reconstituted Complex Reconstituted Complex An interaction is inferred between proteins in vitro. This can include proteins in recombinant form or proteins isolated directly from cells with recombinant or purified bait. For example, GST pull-down assays where a GST-tagged protein is first isolated and then used to fish interactors from cell lysates are considered reconstituted complexes (e.g. PUBMED: 14657240, Fig. 4A or PUBMED: 14761940, Fig. 5). This can also include gel-shifts, surface plasmon resonance, isothermal titration calorimetry (ITC) and bio-layer interferometry (BLI) experiments. The bait-hit directionality may not be clear for 2 interacting proteins. In these cases the directionality is up to the discretion of the curator. | Low | - | BioGRID | 1034691 |
Curated By
- BioGRID