CCDC53
Gene Ontology Molecular Function
Gene Ontology Cellular Component
ULK1
Gene Ontology Biological Process
- autophagic vacuole assembly [IBA]
- axon extension [IBA]
- cellular response to nutrient levels [ISS]
- neuron projection development [IMP]
- positive regulation of autophagy [ISS]
- positive regulation of macroautophagy [IMP]
- protein autophosphorylation [IDA]
- protein localization [IMP]
- protein phosphorylation [NAS]
- regulation of autophagy [IDA, IMP]
- response to starvation [ISS]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
- ATG1/UKL1 signaling complex [IBA]
- ULK1-ATG13-FIP200 complex [IPI]
- autophagic vacuole [IDA]
- cytoplasm [NAS]
- cytosol [IDA]
- extrinsic component of autophagic vacuole membrane [IDA]
- extrinsic component of omegasome membrane [IDA]
- extrinsic component of pre-autophagosomal structure membrane [IDA]
- pre-autophagosomal structure membrane [IDA]
Affinity Capture-MS
An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner is identified by mass spectrometric methods.
Publication
Architecture of the human interactome defines protein communities and disease networks.
The physiology of a cell can be viewed as the product of thousands of proteins acting in concert to shape the cellular response. Coordination is achieved in part through networks of protein-protein interactions that assemble functionally related proteins into complexes, organelles, and signal transduction pathways. Understanding the architecture of the human proteome has the potential to inform cellular, structural, and ... [more]
Quantitative Score
- 0.99709725 [compPASS Score]
Throughput
- High Throughput
Additional Notes
- BioPlex 2.0 HEK 293T cells CompPASS score = 0.99709725, threshold = 0.75. Quantitative scores calculated by CompPASS-Plus (Huttlin et al. Cell, 2015, PMID: 26186194).
- See BioPlex Interactome for details (https://bioplex.hms.harvard.edu/index.php).
- This data has also been reanalyzed as part of BioPlex 3.0 (PMID: 33961781) and may be re-scored from BioPlex 1.0 (PMID: 26186194). Only scores from within BioPlex 2.0 (PMID: 28514442) should be compared directly.
Related interactions
| Interaction | Experimental Evidence Code | Dataset | Throughput | Score | Curated By | Notes |
|---|---|---|---|---|---|---|
| CCDC53 ULK1 | Affinity Capture-MS Affinity Capture-MS An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner is identified by mass spectrometric methods. | High | 0.9996 | BioGRID | 3112511 |
Curated By
- BioGRID