TNFRSF10B
Gene Ontology Biological Process
- activation of NF-kappaB-inducing kinase activity [NAS]
- activation of cysteine-type endopeptidase activity involved in apoptotic process [TAS]
- apoptotic process [NAS, TAS]
- apoptotic signaling pathway [TAS]
- cell surface receptor signaling pathway [TAS]
- cellular response to mechanical stimulus [IEP]
- extrinsic apoptotic signaling pathway via death domain receptors [NAS]
- intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress [IMP]
- positive regulation of I-kappaB kinase/NF-kappaB signaling [IEP]
- regulation of apoptotic process [NAS]
- regulation of extrinsic apoptotic signaling pathway in absence of ligand [TAS]
- response to endoplasmic reticulum stress [IDA]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
VAMP3
Gene Ontology Biological Process
- exocytosis [TAS]
- membrane fusion [TAS]
- mucus secretion [IMP]
- negative regulation of secretion by cell [IDA]
- neurotransmitter secretion [IBA]
- positive regulation of immunoglobulin secretion [IMP]
- positive regulation of receptor recycling [ISS]
- protein complex assembly [TAS]
- regulation of histamine secretion by mast cell [IMP]
- retrograde transport, endosome to Golgi [IDA]
- substrate adhesion-dependent cell spreading [ISS]
- vesicle docking involved in exocytosis [TAS]
- vesicle fusion [IBA]
- vesicle-mediated transport [ISS]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Affinity Capture-MS
An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner is identified by mass spectrometric methods.
Publication
Architecture of the human interactome defines protein communities and disease networks.
The physiology of a cell can be viewed as the product of thousands of proteins acting in concert to shape the cellular response. Coordination is achieved in part through networks of protein-protein interactions that assemble functionally related proteins into complexes, organelles, and signal transduction pathways. Understanding the architecture of the human proteome has the potential to inform cellular, structural, and ... [more]
Quantitative Score
- 0.938770878 [compPASS Score]
Throughput
- High Throughput
Additional Notes
- BioPlex 2.0 HEK 293T cells CompPASS score = 0.938770878, threshold = 0.75. Quantitative scores calculated by CompPASS-Plus (Huttlin et al. Cell, 2015, PMID: 26186194).
- See BioPlex Interactome for details (https://bioplex.hms.harvard.edu/index.php).
- This data has also been reanalyzed as part of BioPlex 3.0 (PMID: 33961781) and may be re-scored from BioPlex 1.0 (PMID: 26186194). Only scores from within BioPlex 2.0 (PMID: 28514442) should be compared directly.
Related interactions
Interaction | Experimental Evidence Code | Dataset | Throughput | Score | Curated By | Notes |
---|---|---|---|---|---|---|
TNFRSF10B VAMP3 | Affinity Capture-MS Affinity Capture-MS An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner is identified by mass spectrometric methods. | High | 0.9802 | BioGRID | 1194803 | |
TNFRSF10B VAMP3 | Affinity Capture-MS Affinity Capture-MS An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner is identified by mass spectrometric methods. | High | 0.7847 | BioGRID | 3045342 |
Curated By
- BioGRID