BAIT
RSC1
RSC subunit protein RSC1, L000004024, YGR056W
Component of the RSC chromatin remodeling complex; required for expression of mid-late sporulation-specific genes; contains two essential bromodomains, a bromo-adjacent homology (BAH) domain, and an AT hook; RSC1 has a paralog, RSC2, that arose from the whole genome duplication
GO Process (6)
GO Function (2)
GO Component (1)
Gene Ontology Biological Process
- ATP-dependent chromatin remodeling [IC, ISS]
- double-strand break repair [IMP]
- double-strand break repair via nonhomologous end joining [IPI]
- nucleosome disassembly [IDA]
- regulation of sporulation resulting in formation of a cellular spore [IMP]
- transcription elongation from RNA polymerase II promoter [IDA]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Saccharomyces cerevisiae (S288c)
PREY
VPS15
GRD8, VAC4, VPL19, VPS40, VPT15, ubiquitin-binding serine/threonine protein kinase VPS15, L000002470, L000002924, S000029641, L000002480, YBR097W
Serine/threonine protein kinase involved in vacuolar protein sorting; functions as a membrane-associated complex with Vps34p; active form recruits Vps34p to the Golgi membrane; interacts with the GDP-bound form of Gpa1p; myristoylated; a fraction is localized, with Vps34p, to nuclear pores at nucleus-vacuole junctions and may facilitate transcription elongation for genes positioned at the nuclear periphery
GO Process (9)
GO Function (2)
GO Component (5)
Gene Ontology Biological Process
- inositol lipid-mediated signaling [IMP]
- late endosome to vacuole transport [IMP]
- macroautophagy [IMP]
- peroxisome degradation [IMP]
- positive regulation of transcription elongation from RNA polymerase II promoter [IMP]
- protein phosphorylation [IDA]
- protein retention in Golgi apparatus [IMP]
- protein targeting to vacuole [IMP]
- vacuole inheritance [IMP]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Saccharomyces cerevisiae (S288c)
Negative Genetic
Mutations/deletions in separate genes, each of which alone causes a minimal phenotype, but when combined in the same cell results in a more severe fitness defect or lethality under a given condition. This term is reserved for high or low throughput studies with scores.
Publication
A Network of Conserved Synthetic Lethal Interactions for Exploration of Precision Cancer Therapy.
An emerging therapeutic strategy for cancer is to induce selective lethality in a tumor by exploiting interactions between its driving mutations and specific drug targets. Here we use a multi-species approach to develop a resource of synthetic lethal interactions relevant to cancer therapy. First, we screen in yeast ∼169,000 potential interactions among orthologs of human tumor suppressor genes (TSG) and ... [more]
Mol. Cell Aug. 04, 2016; 63(3);514-25 [Pubmed: 27453043]
Quantitative Score
- -4.29 [Confidence Score]
Throughput
- High Throughput
Ontology Terms
- phenotype: colony size (APO:0000063)
Additional Notes
- Untreated conditions. SGA was used to score genetic interactions based on the colony size of double versus single mutants. Genetic interactions were considered significant if they had an S score >= 2.0 for positive interactions (epistatic or suppressor interactions) and S score <= -2.5 for negative interactions (synthetic sick/lethal interactions).
Curated By
- BioGRID