BAIT
RPL21
HYPT12, L21, RP11-428O18.5
ribosomal protein L21
GO Process (13)
GO Function (3)
GO Component (5)
Gene Ontology Biological Process
- RNA metabolic process [TAS]
- SRP-dependent cotranslational protein targeting to membrane [TAS]
- cellular protein metabolic process [TAS]
- gene expression [TAS]
- mRNA metabolic process [TAS]
- nuclear-transcribed mRNA catabolic process, nonsense-mediated decay [TAS]
- translation [NAS, TAS]
- translational elongation [TAS]
- translational initiation [TAS]
- translational termination [TAS]
- viral life cycle [TAS]
- viral process [TAS]
- viral transcription [TAS]
Gene Ontology Molecular Function
Homo sapiens
PREY
CENPE
CENP-E, KIF10, MCPH13, PPP1R61
centromere protein E, 312kDa
GO Process (12)
GO Function (4)
GO Component (14)
Gene Ontology Biological Process
- ATP catabolic process [IBA]
- antigen processing and presentation of exogenous peptide antigen via MHC class II [TAS]
- attachment of mitotic spindle microtubules to kinetochore [IMP]
- blood coagulation [TAS]
- kinetochore assembly [NAS]
- metabolic process [IMP]
- microtubule-based movement [IBA, TAS]
- mitotic cell cycle [IBA, TAS]
- mitotic chromosome movement towards spindle pole [TAS]
- mitotic metaphase plate congression [IMP]
- positive regulation of protein kinase activity [IMP]
- regulation of mitotic metaphase/anaphase transition [IMP]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
- chromosome [IDA]
- chromosome, centromeric region [IDA]
- condensed chromosome outer kinetochore [TAS]
- condensed chromosome, centromeric region [IDA]
- cytoplasm [IDA]
- cytosol [TAS]
- kinesin complex [IBA]
- kinetochore [IDA]
- membrane [IDA]
- microtubule [IDA]
- microtubule cytoskeleton [IDA]
- midbody [IDA]
- mitotic spindle midzone [IDA]
- nucleus [IMP]
Homo sapiens
Proximity Label-MS
An interaction is inferred when a bait-enzyme fusion protein selectively modifies a vicinal protein with a diffusible reactive product, followed by affinity capture of the modified protein and identification by mass spectrometric methods.
Publication
Histone Interaction Landscapes Visualized by Crosslinking Mass Spectrometry in Intact Cell Nuclei.
Cells organize their actions partly through tightly controlled protein-protein interactions-collectively termed the interactome. Here we use crosslinking mass spectrometry (XL-MS) to chart the protein-protein interactions in intact human nuclei. Overall, we identified ∼8,700 crosslinks, of which 2/3 represent links connecting distinct proteins. From these data, we gain insights on interactions involving histone proteins. We observed that core histones on the ... [more]
Mol. Cell Proteomics Dec. 01, 2017; 17(10);2018-2033 [Pubmed: 30021884]
Throughput
- High Throughput
Additional Notes
- interaction identified using XL-MS (cross-linking mass spectrometry): TX100-soluble fractions from cells were treated with cross-linker and cross-linked proteins were identified by mass-spectrometry; interaction is undirectional; therefore bait and prey/hit have been assigned arbitrarily; interactions with FDRs (false discovery rates) of 1% or less were reported; this interaction was not detected in parallel experiments using unfractionated cells or TX100-insoluble fractions
Curated By
- BioGRID