BAIT
TBK1
NAK, T2K
TANK-binding kinase 1
GO Process (17)
GO Function (4)
GO Component (3)
Gene Ontology Biological Process
- I-kappaB kinase/NF-kappaB signaling [TAS]
- MyD88-independent toll-like receptor signaling pathway [TAS]
- TRIF-dependent toll-like receptor signaling pathway [TAS]
- inflammatory response [TAS]
- innate immune response [TAS]
- negative regulation of type I interferon production [TAS]
- positive regulation of I-kappaB kinase/NF-kappaB signaling [IEP]
- positive regulation of interferon-alpha production [IDA]
- positive regulation of interferon-beta production [IDA]
- positive regulation of peptidyl-serine phosphorylation [NAS]
- positive regulation of transcription from RNA polymerase II promoter [IDA]
- positive regulation of type I interferon production [TAS]
- response to virus [TAS]
- toll-like receptor 3 signaling pathway [TAS]
- toll-like receptor 4 signaling pathway [TAS]
- toll-like receptor signaling pathway [TAS]
- type I interferon production [TAS]
Gene Ontology Molecular Function
Homo sapiens
PREY
SIRT2
SIR2, SIR2L, SIR2L2
sirtuin 2
GO Process (50)
GO Function (15)
GO Component (22)
Gene Ontology Biological Process
- cellular lipid catabolic process [ISS]
- cellular response to caloric restriction [ISS]
- cellular response to epinephrine stimulus [ISS]
- cellular response to hepatocyte growth factor stimulus [IDA]
- cellular response to hypoxia [IDA]
- cellular response to molecule of bacterial origin [IDA]
- cellular response to oxidative stress [ISS]
- chromatin silencing [NAS]
- chromatin silencing at rDNA [NAS]
- chromatin silencing at telomere [NAS]
- gene silencing [NAS]
- hepatocyte growth factor receptor signaling pathway [IDA]
- histone H3 deacetylation [IMP]
- histone H4 deacetylation [IDA]
- histone deacetylation [IDA, TAS]
- myelination in peripheral nervous system [ISS]
- negative regulation of autophagy [IMP]
- negative regulation of cell proliferation [IMP]
- negative regulation of defense response to bacterium [IMP]
- negative regulation of fat cell differentiation [ISS]
- negative regulation of oligodendrocyte progenitor proliferation [ISS]
- negative regulation of peptidyl-threonine phosphorylation [ISS]
- negative regulation of protein catabolic process [IMP]
- negative regulation of reactive oxygen species metabolic process [ISS]
- negative regulation of striated muscle tissue development [IDA]
- negative regulation of transcription from RNA polymerase II promoter [IDA, IMP]
- negative regulation of transcription from RNA polymerase II promoter in response to hypoxia [IMP]
- negative regulation of transcription, DNA-templated [IDA]
- peptidyl-lysine deacetylation [IDA]
- phosphatidylinositol 3-kinase signaling [IMP]
- positive regulation of DNA binding [ISS]
- positive regulation of attachment of spindle microtubules to kinetochore [ISS]
- positive regulation of cell division [ISS]
- positive regulation of execution phase of apoptosis [ISS]
- positive regulation of meiosis [ISS]
- positive regulation of oocyte maturation [ISS]
- positive regulation of proteasomal ubiquitin-dependent protein catabolic process [ISS]
- positive regulation of proteasomal ubiquitin-dependent protein catabolic process involved in cellular response to hypoxia [IMP]
- positive regulation of transcription from RNA polymerase II promoter [ISS]
- proteasome-mediated ubiquitin-dependent protein catabolic process [IMP]
- protein ADP-ribosylation [NAS, TAS]
- protein deacetylation [IDA, IMP]
- protein kinase B signaling [IMP]
- regulation of cell cycle [IMP]
- regulation of exit from mitosis [NAS]
- regulation of myelination [ISS]
- regulation of phosphorylation [NAS]
- response to redox state [NAS]
- substantia nigra development [IEP]
- tubulin deacetylation [IDA, IMP, ISS]
Gene Ontology Molecular Function- NAD+ ADP-ribosyltransferase activity [TAS]
- NAD+ binding [IDA]
- NAD-dependent histone deacetylase activity [IDA]
- NAD-dependent histone deacetylase activity (H4-K16 specific) [IDA]
- NAD-dependent protein deacetylase activity [IDA, IMP]
- chromatin binding [IDA]
- histone acetyltransferase binding [IPI]
- histone deacetylase activity [IDA]
- histone deacetylase binding [IPI]
- protein binding [IPI]
- protein deacetylase activity [IDA, IMP]
- transcription factor binding [IPI]
- tubulin deacetylase activity [IDA]
- ubiquitin binding [IDA]
- zinc ion binding [IDA]
- NAD+ ADP-ribosyltransferase activity [TAS]
- NAD+ binding [IDA]
- NAD-dependent histone deacetylase activity [IDA]
- NAD-dependent histone deacetylase activity (H4-K16 specific) [IDA]
- NAD-dependent protein deacetylase activity [IDA, IMP]
- chromatin binding [IDA]
- histone acetyltransferase binding [IPI]
- histone deacetylase activity [IDA]
- histone deacetylase binding [IPI]
- protein binding [IPI]
- protein deacetylase activity [IDA, IMP]
- transcription factor binding [IPI]
- tubulin deacetylase activity [IDA]
- ubiquitin binding [IDA]
- zinc ion binding [IDA]
Gene Ontology Cellular Component
- Schmidt-Lanterman incisure [ISS]
- centriole [IDA]
- centrosome [IDA]
- chromatin silencing complex [NAS]
- chromosome [IDA]
- cytoplasm [IDA]
- cytosol [IDA]
- glial cell projection [ISS]
- juxtaparanode region of axon [ISS]
- lateral loop [ISS]
- meiotic spindle [ISS]
- microtubule [IDA]
- midbody [IDA]
- mitotic spindle [IDA]
- myelin sheath [ISS]
- nuclear heterochromatin [ISS]
- nucleus [IDA]
- paranodal junction [ISS]
- paranode region of axon [ISS]
- perikaryon [ISS]
- perinuclear region of cytoplasm [ISS]
- spindle [IDA]
Homo sapiens
Proximity Label-MS
An interaction is inferred when a bait-enzyme fusion protein selectively modifies a vicinal protein with a diffusible reactive product, followed by affinity capture of the modified protein and identification by mass spectrometric methods.
Publication
High-Density Proximity Mapping Reveals the Subcellular Organization of mRNA-Associated Granules and Bodies.
mRNA processing, transport, translation, and ultimately degradation involve a series of dedicated protein complexes that often assemble into large membraneless structures such as stress granules (SGs) and processing bodies (PBs). Here, systematic in vivo proximity-dependent biotinylation (BioID) analysis of 119 human proteins associated with different aspects of mRNA biology uncovers 7424 unique proximity interactions with 1,792 proteins. Classical bait-prey analysis reveals ... [more]
Mol. Cell Dec. 01, 2017; 69(3);517-532.e11 [Pubmed: 29395067]
Throughput
- Low Throughput
Additional Notes
- BioID
- High confidence interactions had a SAINTexpress score or AvgP >= 0.95.
Curated By
- BioGRID