TUP
Gene Ontology Biological Process
- amnioserosa maintenance [IMP]
- axon guidance [IMP]
- chaeta development [IMP]
- chaeta morphogenesis [IMP]
- dendrite guidance [IMP]
- dorsal closure [IMP]
- germ-band shortening [IMP]
- head involution [NAS]
- heart development [IMP]
- lymph gland development [IMP]
- motor neuron axon guidance [IMP]
- muscle cell fate determination [IMP]
- negative regulation of sequence-specific DNA binding transcription factor activity [IDA]
- notum cell fate specification [IMP]
- positive regulation of transcription from RNA polymerase II promoter [IDA]
- regulation of gene expression [IMP]
- terminal region determination [IGI]
- torso signaling pathway [IGI]
Gene Ontology Molecular Function- RNA polymerase II activating transcription factor binding [IPI]
- RNA polymerase II distal enhancer sequence-specific DNA binding [IDA]
- RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity [IDA]
- RNA polymerase II regulatory region sequence-specific DNA binding [IDA]
- protein binding [IPI]
- RNA polymerase II activating transcription factor binding [IPI]
- RNA polymerase II distal enhancer sequence-specific DNA binding [IDA]
- RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity [IDA]
- RNA polymerase II regulatory region sequence-specific DNA binding [IDA]
- protein binding [IPI]
CHI
Gene Ontology Biological Process
- axon guidance [IMP]
- blastoderm segmentation [TAS]
- chaeta development [IMP]
- chaeta morphogenesis [IMP]
- compound eye development [IMP]
- dendrite guidance [IMP]
- imaginal disc-derived wing morphogenesis [IMP]
- nervous system development [IMP]
- phagocytosis [IMP]
- positive regulation of transcription, DNA-templated [IMP]
- regulation of eclosion [IMP]
- regulation of gene expression [IMP]
- transcription, DNA-templated [IMP]
Gene Ontology Molecular Function
Affinity Capture-MS
An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner is identified by mass spectrometric methods.
Publication
Transcription factor networks in Drosophila melanogaster.
Specific cellular fates and functions depend on differential gene expression, which occurs primarily at the transcriptional level and is controlled by complex regulatory networks of transcription factors (TFs). TFs act through combinatorial interactions with other TFs, cofactors, and chromatin-remodeling proteins. Here, we define protein-protein interactions using a coaffinity purification/mass spectrometry method and study 459 Drosophila melanogaster transcription-related factors, representing approximately ... [more]
Quantitative Score
- 14.902503 [HGSCore]
Throughput
- High Throughput
Additional Notes
- High confidence interactions were identified using a HyperGeometric Spectral Counts scoring method (HGSCore) and were filtered to a false discovery rate (FDR) of 2%.
Related interactions
Interaction | Experimental Evidence Code | Dataset | Throughput | Score | Curated By | Notes |
---|---|---|---|---|---|---|
CHI TUP | Phenotypic Enhancement Phenotypic Enhancement A genetic interaction is inferred when mutation or overexpression of one gene results in enhancement of any phenotype (other than lethality/growth defect) associated with mutation or over expression of another gene. | Low | - | FlyBase | - | |
CHI TUP | Phenotypic Suppression Phenotypic Suppression A genetic interaction is inferred when mutation or over expression of one gene results in suppression of any phenotype (other than lethality/growth defect) associated with mutation or over expression of another gene. | Low | - | FlyBase | - | |
TUP CHI | Two-hybrid Two-hybrid Bait protein expressed as a DNA binding domain (DBD) fusion and prey expressed as a transcriptional activation domain (TAD) fusion and interaction measured by reporter gene activation. | High | - | BioGRID | - |
Curated By
- BioGRID