CD74
Gene Ontology Biological Process
- T cell selection [NAS]
- antigen processing and presentation of endogenous antigen [NAS]
- antigen processing and presentation of exogenous peptide antigen via MHC class II [TAS]
- cell proliferation [IDA]
- immunoglobulin mediated immune response [ISS]
- intracellular protein transport [ISS]
- negative regulation of DNA damage response, signal transduction by p53 class mediator [IDA]
- negative regulation of apoptotic process [IDA]
- negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator [IMP]
- negative regulation of peptide secretion [IDA]
- positive regulation of B cell proliferation [IMP]
- positive regulation of ERK1 and ERK2 cascade [IDA, IMP]
- positive regulation of chemokine (C-X-C motif) ligand 2 production [ISS]
- positive regulation of cytokine-mediated signaling pathway [IMP]
- positive regulation of fibroblast proliferation [IMP]
- positive regulation of macrophage cytokine production [ISS]
- positive regulation of neutrophil chemotaxis [ISS]
- positive regulation of peptidyl-tyrosine phosphorylation [IDA]
- prostaglandin biosynthetic process [IDA]
- protein complex assembly [ISS]
- regulation of macrophage activation [NAS]
- signal transduction [IDA]
Gene Ontology Molecular Function- MHC class II protein binding [ISS, NAS]
- MHC class II protein binding, via antigen binding groove [IDA]
- MHC class II protein complex binding [IDA]
- beta-amyloid binding [IPI]
- cytokine binding [IPI]
- cytokine receptor activity [IDA]
- identical protein binding [TAS]
- macrophage migration inhibitory factor binding [IPI]
- protein binding [IPI]
- protein binding involved in protein folding [IDA]
- MHC class II protein binding [ISS, NAS]
- MHC class II protein binding, via antigen binding groove [IDA]
- MHC class II protein complex binding [IDA]
- beta-amyloid binding [IPI]
- cytokine binding [IPI]
- cytokine receptor activity [IDA]
- identical protein binding [TAS]
- macrophage migration inhibitory factor binding [IPI]
- protein binding [IPI]
- protein binding involved in protein folding [IDA]
Gene Ontology Cellular Component
- ER to Golgi transport vesicle membrane [TAS]
- Golgi membrane [TAS]
- MHC class II protein complex [ISS]
- cell surface [IDA]
- clathrin-coated endocytic vesicle membrane [TAS]
- endocytic vesicle membrane [TAS]
- extracellular vesicular exosome [IDA]
- integral component of lumenal side of endoplasmic reticulum membrane [TAS]
- integral component of membrane [IDA]
- intracellular [TAS]
- lysosomal lumen [TAS]
- lysosomal membrane [TAS]
- macrophage migration inhibitory factor receptor complex [IDA]
- membrane [IDA]
- plasma membrane [TAS]
- trans-Golgi network membrane [TAS]
- transport vesicle membrane [TAS]
- vacuole [IDA]
PGRMC1
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Affinity Capture-MS
An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner is identified by mass spectrometric methods.
Publication
Dual proteome-scale networks reveal cell-specific remodeling of the human interactome.
Thousands of interactions assemble proteins into modules that impart spatial and functional organization to the cellular proteome. Through affinity-purification mass spectrometry, we have created two proteome-scale, cell-line-specific interaction networks. The first, BioPlex 3.0, results from affinity purification of 10,128 human proteins-half the proteome-in 293T cells and includes 118,162 interactions among 14,586 proteins. The second results from 5,522 immunoprecipitations in HCT116 ... [more]
Quantitative Score
- 0.862004079 [compPASS Score]
Throughput
- High Throughput
Additional Notes
- BioPlex 3.0 HEK 293T cells CompPASS score = 0.862004079, threshold = 0.75. Quantitative scores are calculated by CompPASS-Plus (Huttlin et al. Cell 2015, PMID: 26186194). The 0.75 threshold represents the top 2% of scores in HEK293T.
- This data may be re-scored from BioPlex 1.0 (PMID: 26186194) and BioPlex 2.0 (PMID: 28514442). Only scores from within the same cell line in BioPlex 3.0 (PMID: 33961781) should be compared directly. For comparison of HEK293T and HCT116 interaction networks with relaxed threshold = 0.1, see BioPlex Interactome (https://bioplex.hms.harvard.edu/index.php).
Related interactions
Interaction | Experimental Evidence Code | Dataset | Throughput | Score | Curated By | Notes |
---|---|---|---|---|---|---|
CD74 PGRMC1 | Affinity Capture-MS Affinity Capture-MS An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner is identified by mass spectrometric methods. | High | - | BioGRID | - |
Curated By
- BioGRID