BAIT
CDC42
CDC42Hs, G25K, RP1-224A6.5
cell division cycle 42
GO Process (25)
GO Function (7)
GO Component (14)
Gene Ontology Biological Process
- Fc-gamma receptor signaling pathway involved in phagocytosis [TAS]
- GTP catabolic process [TAS]
- Golgi organization [ISS]
- T cell costimulation [TAS]
- actin cytoskeleton organization [IDA]
- axon guidance [TAS]
- blood coagulation [TAS]
- epidermal growth factor receptor signaling pathway [TAS]
- establishment of Golgi localization [ISS]
- establishment or maintenance of cell polarity [TAS]
- innate immune response [TAS]
- macrophage differentiation [TAS]
- muscle cell differentiation [TAS]
- negative regulation of epidermal growth factor receptor signaling pathway [TAS]
- negative regulation of protein complex assembly [IPI]
- organelle transport along microtubule [ISS]
- positive regulation of cytokinesis [IMP]
- positive regulation of muscle cell differentiation [TAS]
- positive regulation of pseudopodium assembly [IDA]
- positive regulation of substrate adhesion-dependent cell spreading [IDA]
- regulation of attachment of spindle microtubules to kinetochore [IMP]
- regulation of filopodium assembly [IDA]
- regulation of small GTPase mediated signal transduction [TAS]
- small GTPase mediated signal transduction [TAS]
- substantia nigra development [IEP]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
- Golgi membrane [ISS]
- cytoplasm [IDA]
- cytoplasmic ribonucleoprotein granule [IDA]
- cytosol [TAS]
- extracellular vesicular exosome [IDA]
- filopodium [IDA]
- focal adhesion [IDA]
- membrane [IDA]
- midbody [IDA]
- mitotic spindle [IDA]
- neuron projection [IDA]
- neuronal cell body [IDA]
- plasma membrane [IDA, TAS]
- spindle midzone [IDA]
Homo sapiens
PREY
CAV1
BSCL3, CGL3, LCCNS, MSTP085, PPH3, VIP21
caveolin 1, caveolae protein, 22kDa
GO Process (65)
GO Function (13)
GO Component (15)
Gene Ontology Biological Process
- T cell costimulation [IDA]
- apoptotic signaling pathway [IMP]
- blood coagulation [TAS]
- calcium ion homeostasis [ISS]
- calcium ion transport [ISS]
- caveola assembly [IGI, IMP]
- caveolin-mediated endocytosis [IDA]
- cellular calcium ion homeostasis [ISS]
- cellular response to hyperoxia [IMP]
- cellular response to starvation [IEP]
- cholesterol homeostasis [ISS, TAS]
- cholesterol transport [TAS]
- cytosolic calcium ion homeostasis [IDA]
- inactivation of MAPK activity [ISS]
- leukocyte migration [TAS]
- lipid storage [ISS]
- maintenance of protein location in cell [ISS]
- mammary gland development [ISS]
- mammary gland involution [ISS]
- membrane depolarization [ISS]
- negative regulation of BMP signaling pathway [IDA]
- negative regulation of JAK-STAT cascade [ISS]
- negative regulation of MAPK cascade [ISS]
- negative regulation of anoikis [IMP]
- negative regulation of canonical Wnt signaling pathway [ISS]
- negative regulation of endothelial cell proliferation [ISS]
- negative regulation of epithelial cell differentiation [ISS]
- negative regulation of nitric oxide biosynthetic process [ISS]
- negative regulation of peptidyl-serine phosphorylation [IDA]
- negative regulation of peptidyl-tyrosine autophosphorylation [IMP]
- negative regulation of pinocytosis [IMP]
- negative regulation of potassium ion transmembrane transport [IMP]
- negative regulation of protein binding [IDA]
- negative regulation of protein tyrosine kinase activity [IMP]
- negative regulation of protein ubiquitination [IMP]
- negative regulation of transcription from RNA polymerase II promoter [ISS]
- nitric oxide homeostasis [ISS]
- nitric oxide metabolic process [TAS]
- positive regulation of calcium ion transport into cytosol [ISS]
- positive regulation of canonical Wnt signaling pathway [IMP]
- positive regulation of extrinsic apoptotic signaling pathway [IMP]
- positive regulation of intrinsic apoptotic signaling pathway [IMP]
- positive regulation of metalloenzyme activity [ISS]
- positive regulation of peptidyl-serine phosphorylation [IDA]
- positive regulation of vasoconstriction [ISS]
- protein homooligomerization [ISS]
- protein localization [ISS]
- receptor internalization involved in canonical Wnt signaling pathway [IMP]
- regulation of blood coagulation [IMP]
- regulation of cardiac muscle cell action potential involved in regulation of contraction [IC]
- regulation of fatty acid metabolic process [ISS]
- regulation of inward rectifier potassium channel activity [IMP]
- regulation of membrane repolarization during action potential [IMP]
- regulation of nitric-oxide synthase activity [TAS]
- regulation of peptidase activity [ISS]
- regulation of smooth muscle contraction [ISS]
- response to calcium ion [ISS]
- response to estrogen [IDA]
- response to hypoxia [ISS]
- response to progesterone [IDA]
- skeletal muscle tissue development [ISS]
- small molecule metabolic process [TAS]
- triglyceride metabolic process [ISS]
- vasculogenesis [ISS]
- vesicle organization [IDA]
Gene Ontology Molecular Function- cholesterol binding [TAS]
- enzyme binding [IPI]
- identical protein binding [IPI]
- inward rectifier potassium channel inhibitor activity [IDA]
- ion channel binding [IPI]
- nitric-oxide synthase binding [IPI]
- patched binding [NAS]
- peptidase activator activity [ISS]
- protein binding [IPI]
- protein complex scaffold [TAS]
- protein kinase binding [IPI]
- receptor binding [IPI]
- structural molecule activity [IDA]
- cholesterol binding [TAS]
- enzyme binding [IPI]
- identical protein binding [IPI]
- inward rectifier potassium channel inhibitor activity [IDA]
- ion channel binding [IPI]
- nitric-oxide synthase binding [IPI]
- patched binding [NAS]
- peptidase activator activity [ISS]
- protein binding [IPI]
- protein complex scaffold [TAS]
- protein kinase binding [IPI]
- receptor binding [IPI]
- structural molecule activity [IDA]
Gene Ontology Cellular Component
- Golgi membrane [IDA, TAS]
- apical plasma membrane [IDA]
- basolateral plasma membrane [IDA]
- caveola [IDA, NAS]
- cytoplasmic vesicle [IDA]
- endocytic vesicle membrane [TAS]
- endoplasmic reticulum [IDA]
- endosome [IDA]
- focal adhesion [IDA]
- intracellular [IDA]
- lipid particle [TAS]
- membrane raft [IDA]
- perinuclear region of cytoplasm [IDA, ISS]
- plasma membrane [IDA, TAS]
- protein complex [IDA]
Homo sapiens
Affinity Capture-MS
An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner is identified by mass spectrometric methods.
Publication
Mapping the proximity interaction network of the Rho-family GTPases reveals signalling pathways and regulatory mechanisms.
Guanine nucleotide exchange factors (RhoGEFs) and GTPase-activating proteins (RhoGAPs) coordinate the activation state of the Rho family of GTPases for binding to effectors. Here, we exploited proximity-dependent biotinylation to systematically define the Rho family proximity interaction network from 28 baits to produce 9,939 high-confidence proximity interactions in two cell lines. Exploiting the nucleotide states of Rho GTPases, we revealed the ... [more]
Nat. Cell Biol. Dec. 23, 2019; (); [Pubmed: 31871319]
Throughput
- High Throughput|Low Throughput
Additional Notes
- AvgP greater or equal to 0.95 assessed by SAINT express
- BioID
- CDC42 WT bait, interaction in HEK293 cells
- CDC42 wild type bait, interaction in Hela cells
- CDC42-G12V active mutant bait, interaction in HEK293 cells
- CDC42-G12V active mutant bait, interaction in Hela cells
- CDC42-G15A Nucleotide Free mutant bait, interaction in HEK293 cells
- CDC42-G15A nucleotide free mutant bait, interaction in Hela cells
Curated By
- BioGRID