N
TARBP2
Gene Ontology Biological Process
- gene expression [TAS]
- miRNA loading onto RISC involved in gene silencing by miRNA [IDA]
- negative regulation of defense response to virus by host [IDA]
- negative regulation of protein kinase activity [TAS]
- positive regulation of viral genome replication [IDA]
- pre-miRNA processing [IDA]
- production of siRNA involved in RNA interference [IDA]
- regulation of transcription from RNA polymerase II promoter [TAS]
- regulation of transcription, DNA-templated [TAS]
- regulation of viral transcription [IDA]
- targeting of mRNA for destruction involved in RNA interference [IMP]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Affinity Capture-MS
An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner is identified by mass spectrometric methods.
Publication
Interactome Analysis of the Nucleocapsid Protein of SARS-CoV-2 Virus.
SARS-CoV-2 infection has caused a global pandemic that has severely damaged both public health and the economy. The nucleocapsid protein of SARS-CoV-2 is multifunctional and plays an important role in ribonucleocapsid formation and viral genome replication. In order to elucidate its functions, interaction partners of the SARS-CoV-2 N protein in human cells were identified via affinity purification and mass spectrometry. ... [more]
Throughput
- High Throughput
Additional Notes
- High confidence protein interaction (HEK293T cells)
Related interactions
| Interaction | Experimental Evidence Code | Dataset | Throughput | Score | Curated By | Notes |
|---|---|---|---|---|---|---|
| N TARBP2 | Protein-RNA Protein-RNA An interaction is detected between and protein and an RNA in vitro. | High | - | BioGRID | 3749060 | |
| N TARBP2 | Proximity Label-MS Proximity Label-MS An interaction is inferred when a bait-enzyme fusion protein selectively modifies a vicinal protein with a diffusible reactive product, followed by affinity capture of the modified protein and identification by mass spectrometric methods. | High | - | BioGRID | 2798762 | |
| TARBP2 N | Two-hybrid Two-hybrid Bait protein expressed as a DNA binding domain (DBD) fusion and prey expressed as a transcriptional activation domain (TAD) fusion and interaction measured by reporter gene activation. | Low | - | BioGRID | 3501233 | |
| N TARBP2 | Two-hybrid Two-hybrid Bait protein expressed as a DNA binding domain (DBD) fusion and prey expressed as a transcriptional activation domain (TAD) fusion and interaction measured by reporter gene activation. | High | - | BioGRID | 3501013 |
Curated By
- BioGRID