CLASP1
Gene Ontology Biological Process
- G2/M transition of mitotic cell cycle [TAS]
- axon guidance [TAS]
- cell division [IDA]
- establishment of spindle orientation [IDA, IGI, IMP]
- establishment or maintenance of cell polarity [NAS]
- exit from mitosis [IMP]
- microtubule anchoring [IMP]
- microtubule bundle formation [IMP]
- microtubule cytoskeleton organization [IGI]
- microtubule nucleation [IMP]
- microtubule organizing center organization [IMP]
- mitotic cell cycle [TAS]
- negative regulation of microtubule depolymerization [IGI, IMP]
- negative regulation of microtubule polymerization or depolymerization [IMP]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
CLASP2
Gene Ontology Biological Process
- axon guidance [TAS]
- establishment or maintenance of cell polarity [TAS]
- fucosylation [NAS]
- microtubule anchoring [IMP]
- microtubule nucleation [IMP]
- microtubule organizing center organization [IMP]
- mitotic cell cycle [TAS]
- negative regulation of microtubule depolymerization [NAS]
- regulation of microtubule polymerization or depolymerization [IMP]
- regulation of microtubule-based process [IMP]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Cross-Linking-MS (XL-MS)
An interaction is detected between two proteins using chemically reactive or photo-activatable cross-linking reagents that covalently link amino acids in close proximity, followed by mass spectrometry analysis to identify the linked peptides (reviewed in PMID 37406423, 37104977). Experiments may be carried with live cells or cell lysates in which all proteins are expressed at endogenous levels (e.g. PMID 34349018, 35235311) or with recombinant proteins (e.g., PMID 28537071).
Publication
Trioxane-based MS-cleavable cross-linking mass spectrometry for profiling multimeric interactions of cellular networks.
Cross-linking mass spectrometry (XL-MS) is a powerful technology for mapping protein-protein interactions (PPIs) at the systems level. While bivalent cross-links are effective for defining protein interactions and structures, multivalent cross-links offer enhanced spatial resolution to facilitate characterization of heterogeneous protein complexes. However, their identification remains challenging due to fragmentation complexity and the vast expansion of database search space. Here, we present ... [more]
Throughput
- High Throughput
Ontology Terms
- hek-293 cell (BTO:0000007) [kidney cell line (BTO:0000067)]
Additional Notes
- In vivo TSTO cross-linking of HEK293 cells
- Supplementary Data 3
Related interactions
| Interaction | Experimental Evidence Code | Dataset | Throughput | Score | Curated By | Notes |
|---|---|---|---|---|---|---|
| CLASP1 CLASP2 | Affinity Capture-MS Affinity Capture-MS An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner is identified by mass spectrometric methods. | High | - | BioGRID | 3351425 | |
| CLASP1 CLASP2 | Cross-Linking-MS (XL-MS) Cross-Linking-MS (XL-MS) An interaction is detected between two proteins using chemically reactive or photo-activatable cross-linking reagents that covalently link amino acids in close proximity, followed by mass spectrometry analysis to identify the linked peptides (reviewed in PMID 37406423, 37104977). Experiments may be carried with live cells or cell lysates in which all proteins are expressed at endogenous levels (e.g. PMID 34349018, 35235311) or with recombinant proteins (e.g., PMID 28537071). | High | - | BioGRID | 3680452 | |
| CLASP1 CLASP2 | Negative Genetic Negative Genetic Mutations/deletions in separate genes, each of which alone causes a minimal phenotype, but when combined in the same cell results in a more severe fitness defect or lethality under a given condition. This term is reserved for high or low throughput studies with scores. | Low | - | BioGRID | 3411602 |
Curated By
- BioGRID