NPHS1
Gene Ontology Biological Process
- JNK cascade [ISO]
- MAPK cascade [ISO]
- cell adhesion [ISO]
- glomerular basement membrane development [ISO]
- glomerular filtration [IC]
- glomerular visceral epithelial cell development [ISO]
- myoblast fusion [ISO]
- positive regulation of actin filament polymerization [ISO]
- regulation of excretion [ISO]
- skeletal muscle tissue development [ISO]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
CASK
Gene Ontology Biological Process
- calcium ion import [ISO]
- intracellular protein transport [IMP]
- negative regulation of cell-matrix adhesion [ISO]
- negative regulation of cellular response to growth factor stimulus [ISO]
- negative regulation of keratinocyte proliferation [ISO]
- negative regulation of wound healing [ISO]
- positive regulation of calcium ion import [ISO]
- positive regulation of transcription from RNA polymerase II promoter [ISO]
- protein complex assembly [TAS]
- regulation of nucleic acid-templated transcription [TAS]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
- basement membrane [ISO]
- basolateral plasma membrane [ISO]
- cell-cell junction [ISO]
- ciliary membrane [IDA]
- cytoplasm [IDA, ISO]
- cytosol [ISO, TAS]
- dendrite [IDA]
- focal adhesion [ISO]
- membrane [IDA, ISO]
- nuclear lamina [ISO]
- nuclear matrix [ISO]
- nucleolus [ISO]
- nucleus [IDA, ISO]
- plasma membrane [IDA]
- presynaptic membrane [IDA]
- protein complex [IDA]
- synapse [ISO]
- synaptic membrane [IDA]
Affinity Capture-MS
An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner is identified by mass spectrometric methods.
Publication
Nephrin forms a complex with adherens junction proteins and CASK in podocytes and in Madin-Darby canine kidney cells expressing nephrin.
Mutations in the NPHS1 gene encoding nephrin lead to congenital nephrotic syndrome of the Finnish type. Nephrin is a key component of the glomerular slit diaphragms between epithelial foot processes, but its role in the pathogenesis of this disease is poorly understood. To further clarify the molecular mechanisms involved we investigated the interactions between nephrin and other components of the ... [more]
Throughput
- Low Throughput
Related interactions
| Interaction | Experimental Evidence Code | Dataset | Throughput | Score | Curated By | Notes |
|---|---|---|---|---|---|---|
| NPHS1 CASK | Reconstituted Complex Reconstituted Complex An interaction is inferred between proteins in vitro. This can include proteins in recombinant form or proteins isolated directly from cells with recombinant or purified bait. For example, GST pull-down assays where a GST-tagged protein is first isolated and then used to fish interactors from cell lysates are considered reconstituted complexes (e.g. PUBMED: 14657240, Fig. 4A or PUBMED: 14761940, Fig. 5). This can also include gel-shifts, surface plasmon resonance, isothermal titration calorimetry (ITC) and bio-layer interferometry (BLI) experiments. The bait-hit directionality may not be clear for 2 interacting proteins. In these cases the directionality is up to the discretion of the curator. | Low | - | BioGRID | - |
Curated By
- BioGRID