An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner is identified by mass spectrometric methods.

Publication

The protein interaction landscape of the human CMGC kinase group.

Varjosalo M, Keskitalo S, Van Drogen A, Nurkkala H, Vichalkovski A, Aebersold R, Gstaiger M

Cellular information processing via reversible protein phosphorylation requires tight control of the localization, activity, and substrate specificity of protein kinases, which to a large extent is accomplished by complex formation with other proteins. Despite their critical role in cellular regulation and pathogenesis, protein interaction information is available for only a subset of the 518 human protein kinases. Here we present ... [more]

Cell Rep Apr. 25, 2013; 3(4);1306-20 [Pubmed: 23602568]

Throughput

High Throughput

Ontology Terms

cell line: hek-293 cell (BTO:0000007)

Additional Notes

Exogenous expresssion of bait

Related interactions

Interaction	Experimental Evidence Code	Dataset	Throughput	Score	Curated By	Notes
CDK5 DCLK3	Affinity Capture-MS Affinity Capture-MS An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner is identified by mass spectrometric methods.	Buljan M (2020)	High	238	BioGRID	3483390

Curated By

BioGRID

Interaction Summary

CDK5

Gene Ontology Biological Process

Gene Ontology Molecular Function

ErbB-2 class receptor binding [ISS]ErbB-3 class receptor binding [ISS]acetylcholine receptor activator activity [ISS]kinase activity [ISS]protein binding [IPI]protein kinase activity [TAS]protein serine/threonine kinase activity [IDA, ISS, TAS]tau-protein kinase activity [ISS]

Gene Ontology Cellular Component

DCLK3

Affinity Capture-MS