WNK1
Gene Ontology Biological Process
Gene Ontology Molecular Function
WNK3
Gene Ontology Biological Process
- intracellular signal transduction [ISS]
- negative regulation of apoptotic process [IMP]
- positive regulation of calcium ion transport [IMP]
- positive regulation of establishment of protein localization to plasma membrane [IDA]
- positive regulation of ion transmembrane transporter activity [IDA]
- positive regulation of peptidyl-threonine phosphorylation [IDA]
- positive regulation of rubidium ion transmembrane transporter activity [IDA]
- positive regulation of rubidium ion transport [IDA]
- positive regulation of sodium ion transmembrane transporter activity [IDA, IMP]
- positive regulation of sodium ion transport [IDA]
- protein autophosphorylation [IDA]
- protein phosphorylation [ISS]
- regulation of ion homeostasis [IMP]
Gene Ontology Molecular Function
Gene Ontology Cellular Component
Negative Genetic
Mutations/deletions in separate genes, each of which alone causes a minimal phenotype, but when combined in the same cell results in a more severe fitness defect or lethality under a given condition. This term is reserved for high or low throughput studies with scores.
Publication
Paralog knockout profiling identifies DUSP4 and DUSP6 as a digenic dependence in MAPK pathway-driven cancers.
Although single-gene perturbation screens have revealed a number of new targets, vulnerabilities specific to frequently altered drivers have not been uncovered. An important question is whether the compensatory relationship between functionally redundant genes masks potential therapeutic targets in single-gene perturbation studies. To identify digenic dependencies, we developed a CRISPR paralog targeting library to investigate the viability effects of disrupting 3,284 ... [more]
Quantitative Score
- 0.034162982 [Confidence Score]
Throughput
- High Throughput
Additional Notes
- CRISPR GI screen
- Cell Line: HS936T_SKIN score (0.0341629820412301)
- Cell Line: IPC298_SKIN score (5.84495246772828E-07)
- Experimental Setup: Timecourse-Synthetic Lethality
- GIST: A-phenotypic negative genetic interaction
- Library: Digenic Paralog CRISPR library
- Significance Threshold: GEMINI FDR < 0.05
Related interactions
| Interaction | Experimental Evidence Code | Dataset | Throughput | Score | Curated By | Notes |
|---|---|---|---|---|---|---|
| WNK3 WNK1 | Affinity Capture-MS Affinity Capture-MS An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner is identified by mass spectrometric methods. | High | 20536 | BioGRID | 3486408 | |
| WNK1 WNK3 | Affinity Capture-MS Affinity Capture-MS An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner is identified by mass spectrometric methods. | High | - | BioGRID | 3375202 | |
| WNK1 WNK3 | Cross-Linking-MS (XL-MS) Cross-Linking-MS (XL-MS) An interaction is detected between two proteins using chemically reactive or photo-activatable cross-linking reagents that covalently link amino acids in close proximity, followed by mass spectrometry analysis to identify the linked peptides (reviewed in PMID 37406423, 37104977). Experiments may be carried with live cells or cell lysates in which all proteins are expressed at endogenous levels (e.g. PMID 34349018, 35235311) or with recombinant proteins (e.g., PMID 28537071). | High | - | BioGRID | 3677399 |
Curated By
- BioGRID